Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
Zulema Udaondo Kanchana Sittikankaew Tanaporn Uengwetwanit Thidathip Wongsurawat Chutima Sonthirod PIROON JENJAROENPUN Wirulda Pootakham Nitsara Karoonuthaisiri Intawat Nookaew
Life, 2021-8
PIROON JENJAROENPUN
JENJAROENPUN PIROON
ORCID: 0000-0002-1555-401X
Genomic Analysis of Aeromonas veronii C198, a Novel Mcr-3.41-Harboring Isolate from a Patient with Septicemia in Thailand 10.3390/pathogens9121031
Cell-Free DNA Analysis by Whole-Exome Sequencing for Hepatocellular Carcinoma: A Pilot Study in Thailand 10.3390/cancers13092229
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon 10.3390/life11080862
Thidathip Wongsurawat
Wongsurawat Thidathip / Tip
ORCID: 0000-0002-3659-2074
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016 10.1016/j.meegid.2019.103965
The Interaction between 30b-5p miRNA and MBNL1 mRNA is Involved in Vascular Smooth Muscle Cell Differentiation in Patients with Coronary Atherosclerosis 10.3390/ijms21010011
Systematic genome analysis of a novel arachidonic acid-producing strain uncovered unique metabolic traits in the production of acetyl-CoA-derived products in Mortierellale fungi 10.1016/j.gene.2020.144559
R-loop-forming Sequences Analysis in Thousands of Viral Genomes Identify A New Common Element in Herpesviruses. 10.1038/s41598-020-63101-9
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing 10.1093/ofid/ofaa180
Decoding the epitranscriptional landscape from native RNA sequences 10.1093/nar/gkaa620
Detection and Discrimination of DNA Adducts Differing in Size, Regiochemistry, and Functional Group by Nanopore Sequencing 10.1021/acs.chemrestox.0c00202
Activation-induced cytidine deaminase localizes to G-quadruplex motifs at mutation hotspots in lymphoma 10.1093/narcan/zcaa029
Two SARS-CoV-2 Genome Sequences of Isolates from Rural U.S. Patients Harboring the D614G Mutation, Obtained Using Nanopore Sequencing 10.1128/MRA.01109-20
RNA Sequencing Data Sets and Their Whole-Genome Sequence Assembly of Dengue Virus from Three Serial Passages in Vero Cells 10.1128/MRA.00145-21
Draft Genome Sequence of Methicillin-Resistant Staphylococcus aureus Harboring Staphylococcal Cassette Chromosome mec Type IX, Isolated from a Fatal Bacteremic Pneumonia Case 10.1128/MRA.00616-21
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon 10.3390/life11080862
Intawat Nookaew
Nookaew Intawat
ORCID: 0000-0001-8901-1088
Cell-Free DNA Analysis by Whole-Exome Sequencing for Hepatocellular Carcinoma: A Pilot Study in Thailand 10.3390/cancers13092229
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon 10.3390/life11080862
Tanaporn Uengwetwanit
Uengwetwanit Tanaporn
ORCID: 0000-0003-4710-2613
Transcriptome-based discovery of pathways and genes related to reproduction of the black tiger shrimp (Penaeus monodon) 10.1016/j.margen.2017.08.007
Monitoring of white striping and wooden breast cases and impacts on quality of breast meat collected from commercial broilers (Gallus gallus) 10.5713/ajas.18.0355
A chromosome-level assembly of the black tiger shrimp (Penaeus monodon) genome facilitates the identification of novel growth-associated genes 10.1101/2020.05.14.096073
A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes 10.1111/1755-0998.13357
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon 10.3390/life11080862
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
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Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid. 10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid. 10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium. 10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida. 10.1111/1462-2920.13015
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Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida. 10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E. 10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J. 10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440. 10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital. 10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234. 10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome. 10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1. 10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS. 10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization. 10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants. 10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance. 10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries. 10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing. 10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide. 10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia. 10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016. 10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development. 10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection. 10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis. 10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5. 10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production. 10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators. 10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance 10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure 10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon 10.3390/life11080862