Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics
Miguel A. Matilla
Zulema Udaondo
Tino Krell
George P. C. Salmond
Genome announcements, 2017-3
Tino Krell
Krell Tino
ORCID: 0000-0002-9040-3166
Prevalence and Specificity of Chemoreceptor Profiles in Plant-Associated Bacteria
10.1128/mSystems.00951-21
Identification of ligands for bacterial sensor proteins
10.1007/s00294-015-0528-4
Identification of a chemoreceptor for C2 and C3 carboxylic acids
10.1128/AEM.01529-15
Correlation between signal input and output in PctA and PctB amino acid chemoreceptor of Pseudomonas aeruginosa
10.1111/mmi.12953
Multiple signals modulate the activity of the complex sensor kinase TodS
10.1111/1751-7915.12142
Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle
10.1111/mmi.13045
Tackling the bottleneck in bacterial signal transduction research: High-throughput identification of signal molecules
10.1111/mmi.12975
Pseudomonas chemotaxis
10.1111/1574-6976.12081
RecA protein plays a role in the chemotactic response and chemoreceptor clustering of Salmonella enterica
10.1371/journal.pone.0105578
Structural biology: Specificity of the CheR2 methyltransferase in pseudomonas aeruginosa is directed by a C-terminal pentapeptide in the McpB chemoreceptor
10.1126/scisignal.2004849
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor
10.1128/JB.00589-13
Fructooligosacharides reduce Pseudomonas aeruginosa PAO1 pathogenicity through distinct mechanisms
10.1371/journal.pone.0085772
Qualitative and quantitative assays for flagellum-mediated chemotaxis
10.1007/978-1-4939-0473-0_10
Characterization of molecular interactions using isothermal titration calorimetry
10.1007/978-1-4939-0473-0_16
Fructose 1-phosphate is the one and only physiological effector of the Cra (FruR) regulator of Pseudomonas putida
10.1016/j.fob.2014.03.013
GtrS and GltR form a two-component system: The central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa
10.1093/nar/gku496
The HBM domain: Introducing bimodularity to bacterial sensing
10.1002/pro.2410
Transcriptional control by two interacting regulatory proteins: Identification of the PtxS binding site at PtxR
10.1093/nar/gkt773
The Pseudomonas putidaHskA hybrid sensor kinase responds to redox signals and contributes to the adaptation of the electron transport chain composition in response to oxygen availability
10.1111/1758-2229.12083
Purification, crystallization and preliminary crystallographic analysis of the ligand-binding regions of the PctA and PctB chemoreceptors from Pseudomonas aeruginosa in complex with amino acids
10.1107/S1744309113023592
High specificity in CheR methyltransferase function: CheR2 of pseudomonas putida is essential for chemotaxis, whereas CheR1 is involved in biofilm formation
10.1074/jbc.M113.472605
Bioavailability of pollutants and chemotaxis
10.1016/j.copbio.2012.08.011
Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA)
10.1111/mmi.12255
The Pseudomonas putida HskA hybrid sensor kinase controls the composition of the electron transport chain
10.1111/1758-2229.12017
Tactic responses to pollutants and their potential to increase biodegradation efficiency
10.1111/jam.12076
Evidence for chemoreceptors with bimodular ligand-binding regions harboring two signal-binding sites
10.1073/pnas.1201400109
In situ X-ray data collection from highly sensitive crystals of Pseudomonas putida PtxS in complex with DNA
10.1107/S1744309112028540
Genes Encoding Cher-TPR Fusion Proteins Are Predominantly Found in Gene Clusters Encoding Chemosensory Pathways with Alternative Cellular Functions
10.1371/journal.pone.0045810
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Responses of Pseudomonas putida to toxic aromatic carbon sources
10.1016/j.jbiotec.2012.01.026
Genes for Carbon metabolism and the ToxA virulence factor in pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS
10.1371/journal.pone.0039390
Identification of a novel calcium binding motif based on the detection of sequence insertions in the animal peroxidase domain of bacterial proteins
10.1371/journal.pone.0040698
Study of the TmoS/TmoT two-component system: Towards the functional characterization of the family of TodS/TodT like systems
10.1111/j.1751-7915.2011.00322.x
Solvent tolerance in Gram-negative bacteria
10.1016/j.copbio.2011.11.015
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas
10.1111/j.1758-2229.2011.00255.x
Construction of a prototype two-component system from the phosphorelay system TodS/TodT
10.1093/protein/gzs001
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate
10.1107/S1744309112004940
The Crp regulator of Pseudomonas putida: Evidence of an unusually high affinity for its physiological effector, cAMP
10.1111/j.1462-2920.2011.02622.x
Laboratory research aimed at closing the gaps in microbial bioremediation
10.1016/j.tibtech.2011.06.007
Effect of the β-propiolactone treatment on the adsorption and fusion of influenza A/Brisbane/59/2007 and A/New Caledonia/20/1999 virus H1N1 on a dimyristoylphosphatidylcholine/ganglioside GM3 mixed phospholipids monolayer at the air-water interface
10.1021/la2027175
Unbinding forces of single pertussis toxin-antibody complexes measured by atomic force spectroscopy correlate with their dissociation rates determined by surface plasmon resonance
10.1002/jmr.1159
Three dimensional morphology of rabies virus studied by cryo-electron tomography
10.1016/j.jsb.2011.07.003
Intramolecular signal transmission in a tetrameric repressor of the IclR family
10.1073/pnas.1018894108
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas
10.1111/j.1462-2920.2011.02493.x
Diversity at its best: Bacterial taxis
10.1111/j.1462-2920.2010.02383.x
Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
10.1074/jbc.M110.187583
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor
10.1002/jmr.1101
Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators
10.1101/gad.603510
Sensing of environmental signals: Classification of chemoreceptors according to the size of their ligand binding regions
10.1111/j.1462-2920.2010.02325.x
Bacterial sensor kinases: Diversity in the recognition of environmental signals
10.1146/annurev.micro.112408.134054
Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor
10.1128/JB.00520-10
Catabolite repression of the TodS/TodT two-component system and effector-dependent transphosphorylation of TodT as the basis for toluene dioxygenase catabolic pathway control
10.1128/JB.00379-10
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: Differential chemotactic response towards receptor ligands
10.1074/jbc.M110.110403
Struggling to get a universal meningococcal vaccine and novel uses for bacterial toxins in cancer treatment
10.1111/j.1751-7915.2010.00195.x
PhhR Binds to Target Sequences at Different Distances with Respect to RNA Polymerase in Order to Activate Transcription
10.1016/j.jmb.2009.09.045
The heat, drugs and knockout systems of Microbial Biotechnology
10.1111/j.1751-7915.2009.00144.x
Regulation of glucose metabolism in Pseudomonas. The phosphorylative branch and Entner-Doudoroff enzymes are regulated by a repressor containing a sugar isomerase domain
10.1074/jbc.M109.014555
The enigma of cytosolic two-component systems: A hypothesis
10.1111/j.1758-2229.2009.00020.x
The sensor kinase TodS operates by a multiple step phosphorelay mechanism involving two autokinase domains
10.1074/jbc.M900521200
Responses of Pseudomonas to small toxic molecules by a mosaic of domains
10.1016/j.mib.2009.02.001
Two Levels of Cooperativeness in the Binding of TodT to the tod Operon Promoter
10.1016/j.jmb.2008.10.011
Hexameric oligomerization of mitochondrial peroxiredoxin PrxIIF and formation of an ultrahigh affinity complex with its electron donor thioredoxin Trx-o
10.1093/jxb/ern177
Microcalorimetry: A response to challenges in modern biotechnology
10.1111/j.1751-7915.2007.00013.x
Hierarchical Binding of the TodT Response Regulator to Its Multiple Recognition Sites at the tod Pathway Operon Promoter
10.1016/j.jmb.2007.12.004
Complexity in efflux pump control: Cross-regulation by the paralogues TtgV and TtgT
10.1111/j.1365-2958.2007.06004.x
Biochemical and molecular characterization of the mitochondrial peroxiredoxin PsPrxII F from Pisum sativum
10.1016/j.plaphy.2007.07.017
Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals
10.1073/pnas.0701547104
Optimization of the Palindromic Order of the TtgR Operator Enhances Binding Cooperativity
10.1016/j.jmb.2007.04.025
The Transcriptional Repressor TtgV Recognizes a Complex Operator as a Tetramer and Induces Convex DNA Bending
10.1016/j.jmb.2007.04.022
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials
10.1016/j.jmb.2007.03.062
Different modes of binding of mono- and biaromatic effectors to the transcriptional regulator TTGV: Role in differential derepression from its cognate operator
10.1074/jbc.M610032200
The use of microcalorimetry to study regulatory mechanisms in pseudomonas
10.1007/978-1-4020-6097-7_9
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins
10.1073/pnas.0602902103
The IclR family of transcriptional activators and repressors can be defined by a single profile
10.1110/ps.051857206
Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression
10.1074/jbc.M511095200
Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors
10.1111/j.1574-6976.2005.00008.x
Characterization of different strains of poliovirus and influenza virus by differential scanning calorimetry
10.1042/BA20040113
The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: Evidence from isothermal titration calorimetry
10.1074/jbc.M500783200
Do Th1 or Th2 sequence motifs exist in proteins? Identification of amphipatic immunomodulatory domains in Helicobacter pylori catalase
10.1016/j.imlet.2004.09.011
Role of transferrin receptor from a Neisseria meningitidis tbpB isotype II strain in human transferrin binding and virulence
10.1128/IAI.72.6.3461-3470.2004
HIV-1 gp41 and gp160 are hyperthermostable proteins in a mesophilic environment: Characterization of gp41 mutants
10.1111/j.1432-1033.2004.04068.x
Transferrin-Binding Protein B of Neisseria meningitidis: Sequence-Based Identification of the Transferrin-Binding Site Confirmed by Site-Directed Mutagenesis
10.1128/JB.186.3.850-857.2004
The use of microcalorimetry to characterize tetanus neurotoxin, pertussis toxin and filamentous haemagglutinin
10.1042/BA20030089
Insight into the structure and function of the transferrin receptor from Neisseria meningitidis using microcalorimetric techniques
10.1074/jbc.M204461200
Affinity-purification of Transferrin-binding protein B under nondenaturing conditions
10.1006/prep.2001.1593
The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor
10.1016/S0969-2126(02)00747-5
The shikimate pathway and its branches in apicomplexan parasites
10.1086/338004
Sequence requirements of the ATP-binding site within the C-terminal nucleotide-binding domain of mouse P-glycoprotein: Structure-activity relationships for flavonoid binding
10.1021/bi010657c
Biochemical and X-ray crystallographic studies on shikimate kinase: The important structural role of the P-loop lysine
10.1110/ps.52501
The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction
10.1038/9287
The folding and assembly of the dodecameric type II dehydroquinases
10.1042/0264-6021:3380195
Evidence for the shikimate pathway in apicomplexan parasites
10.1038/31723
The three-dimensional structure of shikimate kinase
10.1006/jmbi.1998.1755
93 the interaction of shikimate kinase from Erwinia chrystanthemi with substrates
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Crystallization and preliminary X-ray crystallographic analysis of shikimate kinase from Erwinia chrysanthemi
10.1107/S0907444997004319
Localization of the active site of type II dehydroquinases. Identification of a common arginine-containing motif in the two classes of dehydroquinases
10.1074/jbc.271.40.24492
Phosphoglycerate mutase from Schizosaccharomyces pombe: Development of an expression system and characterisation of three histidine mutants of the enzyme
10.1016/0167-4838(96)00046-5
The use of electrospray mass spectrometry to identify an essential arginine residue in type II dehydroquinases
10.1016/0014-5793(95)00083-L
The use of mass spectrometry to examine the formation and hydrolysis of the phosphorylated form of phosphoglycerate mutase
10.1016/0014-5793(95)00044-A
Identification and purification of a distinct dihydrolipoamide dehydrogenase from pea chloroplasts
10.1007/bf00208309
Microcalorimetry as a General Technique to Characterize Ligand Binding
10.1007/8623_2014_3
The Use of Microcalorimetric Techniques to Study the Structure and Function of the Transferrin Receptor from Neisseria meningitidis
10.1007/978-3-662-08722-0_14
The folding and assembly of the dodecameric type II dehydroquinases
10.1042/bj3380195
Chemical modification monitored by electrospray mass spectrometry: a rapid and simple method for identifying and studying functional residues in enzymes
10.1111/j.1399-3011.1998.tb01217.x
Identification of a chemoreceptor that specifically mediates chemotaxis toward metabolizable purine derivatives
10.1111/mmi.13215
Molecular Responses to Solvent Stress: Strategies for Living in Unpalatable Substrates
10.1007/978-4-431-53898-1_47
McpQ is a specific citrate chemoreceptor that responds preferentially to citrate/metal ion complexes
10.1111/1462-2920.13030
Paralogous Regulators ArsR1 and ArsR2 of Pseudomonas putida KT2440 as a Basis for Arsenic Biosensor Development
10.1128/AEM.00606-16
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid
10.1128/genomeA.00373-16
The expression of many chemoreceptor genes depends on the cognate chemoeffector as well as on the growth medium and phase
10.1007/s00294-016-0646-7
Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures
10.1016/j.pep.2016.10.007
Disparate response to microoxia and nitrogen oxides of the Bradyrhizobium japonicum napEDABC, nirK and norCBQD denitrification genes
10.1016/j.niox.2017.02.002
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics
10.1128/genomeA.01752-16
Recent Advances and Future Prospects in Bacterial and Archaeal Locomotion and Signal Transduction
10.1128/JB.00203-17
Sensory Repertoire of Bacterial Chemoreceptors
10.1128/MMBR.00033-17
Exploring the (Almost) Unknown: Archaeal Two-Component Systems
10.1128/JB.00774-17
The plant compound rosmarinic acid induces a broad quorum sensing response in Pseudomonas aeruginosa PAO1
10.1111/1462-2920.14301
An auxin controls bacterial antibiotics production
10.1093/nar/gky766
Recognition of dominant attractants by key chemoreceptors mediates recruitment of plant growth‐promoting rhizobacteria
10.1111/1462-2920.14472
Functional Annotation of Bacterial Signal Transduction Systems: Progress and Challenges
10.3390/ijms19123755
The Molecular Mechanism of Nitrate Chemotaxis via Direct Ligand Binding to the PilJ Domain of McpN
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The involvement of McpB chemoreceptor from Pseudomonas aeruginosa PAO1 in virulence
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Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato
10.1128/mBio.01868-19
How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
10.1128/mBio.03066-19
The use of isothermal titration calorimetry to unravel chemotactic signalling mechanisms
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Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide
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Determination of ligand profiles for pseudomonas aeruginosa solute binding proteins
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Concentration dependent effect of plant root exudates on the chemosensory systems of Pseudomonas putida KT2440
10.3389/fmicb.2019.00078
High-Affinity Chemotaxis to Histamine Mediated by the TlpQ Chemoreceptor of the Human Pathogen Pseudomonas aeruginosa.
10.1128/mbio.01894-18
Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida
10.1016/j.jmb.2018.05.008
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators
10.1111/1751-7915.13263
The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists
10.1038/s41598-018-20283-7
The effect of bacterial chemotaxis on host infection and pathogenicity
10.1093/femsre/fux052
High-throughput screening to identify chemoreceptor ligands
10.1007/978-1-4939-7577-8_23
Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa
10.1073/pnas.1708842114
Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa
10.1111/1462-2920.13871
Metabolic value chemoattractants are preferentially recognized at broad ligand range chemoreceptor of Pseudomonas putida KT2440
10.3389/fmicb.2017.00990
Riboswitches as potential targets for the development of anti-biofilm drugs
10.2174/1568026617666170407163517
Chemoreceptor-based signal sensing
10.1016/j.copbio.2016.11.021
Identification of a chemoreceptor in Pseudomonas aeruginosa that specifically mediates chemotaxis toward α-ketoglutarate
10.3389/fmicb.2016.01937
Two different mechanisms mediate chemotaxis to inorganic phosphate in Pseudomonas aeruginosa
10.1038/srep28967
Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator
10.1126/scisignal.aaa8271
Biosynthesis of the acetyl-coA carboxylase-inhibiting antibiotic, andrimid in Serratia is regulated by hfq and the LysR-type transcriptional regulator, admX
10.1111/1462-2920.13241
Assessment of the contribution of chemoreceptor-based signalling to biofilm formation
10.1111/1462-2920.13170
So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals
10.1080/19420889.2016.1156832
Identification and Characterization of Bacterial Chemoreceptors Using Quantitative Capillary and Gradient Plate Chemotaxis Assays
10.21769/bioprotoc.1789
Shikimate pathway in apicomplexan parasites
10.1038/16618
Degeneration of rat cholinergic basal forebrain neurons and reactive changes in nerve growth factor expression after chronic neurotoxic injury--I. Degeneration and plastic response of basal forebrain neurons.
10.1016/0306-4522(94)00526-b
Degeneration of rat cholinergic basal forebrain neurons and reactive changes in nerve growth factor expression after chronic neurotoxic injury--II. Reactive expression of the nerve growth factor gene in astrocytes.
10.1016/0306-4522(94)00523-8
Sensing, Signaling, and Uptake: An Introduction
10.1007/978-3-319-50542-8_29
The Family of Two-Component Systems That Regulate Hydrocarbon Degradation Pathways
10.1007/978-3-319-50542-8_6
Genetics of Sensing, Accessing, and Exploiting Hydrocarbons
10.1007/978-3-319-50542-8_46
Extrusion Pumps for Hydrocarbons: An Efficient Evolutionary Strategy to Confer Resistance to Hydrocarbons
10.1007/978-3-319-50542-8_47
Membrane Composition and Modifications in Response to Aromatic Hydrocarbons in Gram-Negative Bacteria
10.1007/978-3-319-50542-8_48
Plant growth promotion and biocontrol mediated by plant associated bacteria
10.1007/978-981-10-5514-0
Two-Component Systems that Control the Expression of Aromatic Hydrocarbon Degradation Pathways
10.1002/9781119004813.ch21
Microcalorimetry as a General Technique to Characterize Ligand Binding: What Needs to be Considered When Analyzing Hydrocarbons
10.1007/978-3-540-77587-4_331
Protocols for the Characterization of Solvent Tolerant Microorganisms: Construction and Characterization of Mutants
10.1007/978-3-540-77587-4_309
Genetics of Accessing and Exploiting Hydrocarbons
10.1007/978-3-540-77587-4_109
Removal of Hydrocarbons and Other Related Chemicals via the Rhizosphere of Plants
10.1007/978-3-540-77587-4_190
Extrusion Pumps for Hydrocarbons: An Efficient Evolutionary Strategy to Confer Resistance to Hydrocarbons
10.1007/978-3-540-77587-4_110
Membrane Composition and Modifications in Response to Aromatic Hydrocarbons in Gram Negative Bacteria
10.1007/978-3-540-77587-4_111
The structural basis for signal promiscuity in a bacterial chemoreceptor
10.1111/febs.15580
Evidence for Pentapeptide-Dependent and Independent CheB Methylesterases
10.3390/ijms21228459
Reply: Shikimate pathway in apicomplexan parasites
10.1038/16621
Chemoreceptors with C-terminal pentapeptides for CheR and CheB binding are abundant in bacteria that maintain host interactions
10.1016/j.csbj.2020.07.006
Pseudomonas aeruginosa as a Model To Study Chemosensory Pathway Signaling
10.1128/MMBR.00151-20
Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae
10.1038/s41522-020-00177-1
Low CyaA expression and anti‐cooperative binding of cAMP to CRP frames the scope of the cognate regulon of Pseudomonas putida
10.1111/1462-2920.15422
Amino acid sensor conserved from bacteria to humans
10.1101/2021.05.05.442820
Histamine: A Bacterial Signal Molecule
10.3390/ijms22126312
Chemotaxis of Beneficial Rhizobacteria to Root Exudates: The First Step towards Root–Microbe Rhizosphere Interactions
10.3390/ijms22136655
Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae
10.1128/MRA.00559-21
A catalogue of signal molecules that interact with sensor kinases, chemoreceptors and transcriptional regulators
10.1093/femsre/fuab043
Miguel A. Matilla
Matilla Miguel A.
ORCID: 0000-0002-8468-9604
The broad-spectrum antibiotic, zeamine, kills the nematode worm Caenorhabditis elegans
10.3389/fmicb.2015.00137
Bacteriophage ϕMAM1, a viunalikevirus, is a broad-host-range, high-efficiency generalized transducer that infects environmental and clinical isolates of the enterobacterial genera Serratia and Kluyvera
10.1128/AEM.01546-14
Viunalikeviruses are environmentally common agents of horizontal gene transfer in pathogens and biocontrol bacteria
10.1038/ismej.2014.150
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1
10.1111/1462-2920.12037
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome
10.1111/1751-7915.12061
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Bacterial Biosynthetic Gene Clusters Encoding the Anti-cancer Haterumalide Class of Molecules BIOGENESIS OF THE BROAD SPECTRUM ANTIFUNGAL AND ANTI-OOMYCETE COMPOUND, OOCYDIN A
10.1074/jbc.M112.401026
Complete genome sequence of Serratia plymuthica bacteriophage ΦMAM1
10.1128/JVI.02702-12
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas
10.1111/j.1462-2920.2011.02493.x
Complete Genome of the Plant Growth-Promoting Rhizobacterium Pseudomonas putida BIRD-1
10.1128/JB.01281-10
Cyclic diguanylate turnover mediated by the sole GGDEF/EAL response regulator in Pseudomonas putida: its role in the rhizosphere and an analysis of its target processes
10.1111/j.1462-2920.2011.02499.x
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Pseudomonas putida KT2440 causes induced systemic resistance and changes in Arabidopsis root exudation
10.1111/j.1758-2229.2009.00091.x
Involvement of ethylene in seed physiology
10.1016/j.plantsci.2008.01.014
Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere
10.1186/gb-2007-8-9-r179
Temperature and pyoverdine-mediated iron acquisition control surface motility of Pseudomonas putida
10.1111/j.1462-2920.2007.01286.x
Genetic dissection of the regulatory network associated with high c-di-GMP levels in Pseudomonas putida KT2440
10.3389/fmicb.2016.01093
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
Biosynthesis of the acetyl-coA carboxylase-inhibiting antibiotic, andrimid in Serratia is regulated by hfq and the LysR-type transcriptional regulator, admX
10.1111/1462-2920.13241
A plasmid-transposon hybrid mutagenesis system effective in a broad range of enterobacteria
10.3389/fmicb.2015.01442
Assessment of the contribution of chemoreceptor-based signalling to biofilm formation
10.1111/1462-2920.13170
Identification of ligands for bacterial sensor proteins
10.1007/s00294-015-0528-4
McpQ is a specific citrate chemoreceptor that responds preferentially to citrate/metal ion complexes
10.1111/1462-2920.13030
Identification of a Chemoreceptor for C2 and C3 Carboxylic Acids.
10.1128/aem.01529-15
Biosynthesis of the antifungal haterumalide, oocydin A, in Serratia, and its regulation by quorum sensing, RpoS and Hfq
10.1111/1462-2920.12839
A technology for the investigation of biofilm transmission under shearing pressures
10.1111/1751-7915.12848
Metabolic value chemoattractants are preferentially recognized at broad ligand range chemoreceptor of Pseudomonas putida KT2440
10.3389/fmicb.2017.00990
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Chemoreceptor-based signal sensing
10.1016/j.copbio.2016.11.021
The effect of bacterial chemotaxis on host infection and pathogenicity
10.1093/femsre/fux052
Novel pressure sensors and bioreporters in the synthetic biology era
10.1111/1462-2920.14019
The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists
10.1038/s41598-018-20283-7
High-throughput screening to identify chemoreceptor ligands
10.1007/978-1-4939-7577-8_23
Shedding light into the mechanisms of formation and resuscitation of persistent bacterial cells
10.1111/1462-2920.14334
Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida
10.1016/j.jmb.2018.05.008
Functional Annotation of Bacterial Signal Transduction Systems: Progress and Challenges
10.3390/ijms19123755
High-affinity chemotaxis to histamine mediated by the TlpQ chemoreceptor of the human pathogen pseudomonas aeruginosa
10.1128/mBio.01894-18
An auxin controls bacterial antibiotics production
10.1093/nar/gky766
Training bacteria to produce environmentally friendly polymers of industrial and medical relevance
10.1111/1751-7915.13470
The involvement of McpB chemoreceptor from Pseudomonas aeruginosa PAO1 in virulence
10.1038/s41598-019-49697-7
The Molecular Mechanism of Nitrate Chemotaxis via Direct Ligand Binding to the PilJ Domain of McpN
10.1128/mbio.02334-18
Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato
10.1128/mbio.01868-19
Concentration Dependent Effect of Plant Root Exudates on the Chemosensory Systems of Pseudomonas putida KT2440
10.3389/fmicb.2019.00078
Chemical fertilization: a short‐term solution for plant productivity?
10.1111/1751-7915.13515
Metabolic Responses of Plants Upon Different Plant-Pathogen Interactions
10.1016/B978-0-12-812689-9.00010-8
Ethylene: Role in plants under environmental stress
10.1007/978-1-4614-8600-8_7
Using Genomics to Unveil Bacterial Determinants of Rhizosphere Life Style
10.1002/9781118297674.ch2
Determination of ligand profiles for pseudomonas aeruginosa solute binding proteins
10.3390/ijms20205156
Genome sequence of the oocydin a-producing rhizobacterium serratia plymuthica 4Rx5
10.1128/MRA.00997-18
How bacterial chemoreceptors evolve novel ligand specificities
10.1128/mBio.03066-19
Identification of a chemoreceptor in Pseudomonas aeruginosa that specifically mediates chemotaxis toward α-ketoglutarate
10.3389/fmicb.2016.01937
The use of isothermal titration calorimetry to unravel chemotactic signalling mechanisms
10.1111/1462-2920.15035
Mining for novel antibiotics in the age of antimicrobial resistance
10.1111/1751-7915.13662
The structural basis for signal promiscuity in a bacterial chemoreceptor
10.1111/febs.15580
Evidence for Pentapeptide-Dependent and Independent CheB Methylesterases
10.3390/ijms21228459
Pseudomonas aeruginosa as a Model To Study Chemosensory Pathway Signaling
10.1128/MMBR.00151-20
Amino acid sensor conserved from bacteria to humans
10.1101/2021.05.05.442820
Histamine: A Bacterial Signal Molecule
10.3390/ijms22126312
Facing crises in the 21st century: microfluidics approaches for antibiotic discovery
10.1111/1751-7915.13908
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
