Genome and evolution of the shade-requiring medicinal herbPanax ginseng
Nam-Hoon Kim Murukarthick Jayakodi Sang-Choon Lee Beom-Soon Choi Woojong Jang Junki Lee Hyun Hee Kim Nomar E. Waminal Meiyappan Lakshmanan Binh van Nguyen Yun Sun Lee Hyun-Seung Park Hyun Jo Koo Jee Young Park Sampath Perumal Ho Jun Joh Hana Lee Jinkyung Kim In Seo Kim Kyunghee Kim Lokanand Koduru Kyo Bin Kang Sang Hyun Sung Yeisoo Yu Daniel S. Park Doil Choi Eunyoung Seo Seungill Kim Young-Chang Kim Dong Yun Hyun Youn-Il Park Changsoo Kim Tae-Ho Lee Hyun Uk Kim Moon Soo Soh Yi Lee Jun Gyo In Heui-Soo Kim Yong-Min Kim Deok-Chun Yang Rod A. Wing Dong-Yup Lee Andrew H. Paterson Tae-Jin Yang
Plant Biotechnology Journal, 2018
https://doi.org/10.1111/pbi.12926
Kyo Bin Kang
Kang Kyo Bin
ORCID: 0000-0003-3290-1017
Email: kbkang@sookmyung.ac.kr
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Map-based cloning in crop plants: tomato as a model system II. Isolation and characterization of a set of overlapping yeast artificial chromosomes encompassing the jointless locus 10.1007/BF00282751
Physical and genetic structure of the maize genome reflects its complex evolutionary history 10.1371/journal.pgen.0030123
Pcr amplification from single seeds, facilitating DNA marker-assisted breeding 10.1093/nar/21.10.2527
Detailed analysis of a contiguous 22-Mb region of the maize genome 10.1371/journal.pgen.1000728
A bacterial artificial chromosome library for barley (Hordeum vulgare L.) and the identification of clones containing putative resistance genes 10.1007/s001220051584
Comparative sequence analysis of the SALT OVERLY SENSITIVE1 orthologous region in Thellungiella halophila and Arabidopsis thaliana 10.1016/j.ygeno.2009.05.007
Global genomic diversity of Oryza sativa varieties revealed by comparative physical mapping 10.1534/genetics.113.159970
A physical, genetic and functional sequence assembly of the barley genome 10.1038/nature11543
Genetic mapping of jointless-2 to tomato chromosome 12 using RFLP and RAPD markers 10.1007/s001220051422
RiTE database: A resource database for genus-wide rice genomics and evolutionary biology 10.1186/s12864-015-1762-3
Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium 10.1101/gr.5282906
Evolution of plant genome architecture 10.1186/s13059-016-0908-1
Single nucleotide polymorphisms and insertion-deletions for genetic markers and anchoring the maize fingerprint contig physical map 10.2135/cropsci2004.0706
Comparative BAC-based physical mapping of Oryza sativa ssp. indica var. 93-11 and evaluation of the two rice reference sequence assemblies 10.1111/tpj.12412
The promoter signatures in rice LEA genes can be used to build a co-expressing LEA gene network 10.1007/s12284-008-9017-4
BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution 10.1007/s11103-013-0077-5
Efficient insertional mutagenesis in rice using the maize En/Spm elements 10.1111/j.1365-313X.2005.02570.x
The 19 genomes of Drosophila: A BAC library resource for genus-wide and genome-scale comparative evolutionary research 10.1534/genetics.111.126540
Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains 10.1186/1471-2164-9-621
The genome of Theobroma cacao 10.1038/ng.736
Evaluation of genetic variation in the daylily (Hemerocallis spp.) using AFLP markers 10.1007/s001220051672
The reference genome of the halophytic plant Eutrema salsugineum 10.3389/fpls.2013.00046
Plant centromere organization: a dynamic structure with conserved functions 10.1016/j.tig.2007.01.004
Random sheared fosmid library as a new genomic tool to accelerate complete finishing of rice (Oryza sativa spp. Nipponbare) genome sequence: Sequencing of gap-specific fosmid clones uncovers new euchromatic portions of the genome 10.1007/s00122-005-0091-3
Toward a cytological characterization of the rice genome 10.1101/gr.194601
Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza 10.1111/j.1365-313X.2007.03388.x
A phylogenetic analysis of indel dynamics in the cotton genus 10.1093/molbev/msn085
De novo next generation sequencing of plant genomes 10.1007/s12284-009-9025-z
Transposable element distribution, abundance and role in genome size variation in the genus Oryza 10.1186/1471-2148-7-152
Functional genomics of cell elongation in developing cotton fibers 10.1007/s11103-004-0392-y
Sorghum expressed sequence tags identify signature genes for drought, pathogenesis, and skotomorphogenesis from a milestone set of 16,801 unique transcripts 10.1104/pp.105.066134
A fine physical map of the rice chromosome 4 10.1101/gr.48902
Integration of the draft sequence and physical map as a framework for genomic research in soybean (glycine max (l.) merr.) and wild soybean (glycine soja sieb. and zucc.) 10.1534/g3.111.001834
Rice genome sequence: The foundation for understanding the genetic systems 10.1007/0-387-48914-2_2
A large-insert (130 kbp) bacterial artificial chromosome library of the rice blast fungus Magnaporthe grisea: Genome analysis, contig assembly, and gene cloning 10.1006/fgbi.1997.0996
Construction of a 1.2-Mb contig including the citrus tristeza virus resistance gene locus using a bacterial artificial chromosome library of Poncirus trifoliata (L.) Raf. 10.1139/gen-44-3-382
Localization of jointless-2 gene in the centromeric region of tomato chromosome 12 based on high resolution genetic and physical mapping 10.1007/s00122-003-1429-3
Profiling Bacterial Diversity and Taxonomic Composition on Speleothem Surfaces in Kartchner Caverns, AZ 10.1007/s00248-012-0143-6
Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae) 10.1600/036364410792495872
Erratum: Genome sequence of the palaeopolyploid soybean (Nature (2010) 463 (178-183)) 10.1038/nature08957
Structural features of the rice chromosome 4 centromere 10.1093/nar/gkh521
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana: The Rice Annotation Project 10.1101/gr.5509507
Comparative Sequence Analysis of the Ghd7 Orthologous Regions Revealed Movement of Ghd7 in the Grass Genomes 10.1371/journal.pone.0050236
Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes 10.1073/pnas.94.7.3431
Ortholog alleles at Xa3/Xa26 locus confer conserved race-specific resistance against xanthomonas oryzae in rice 10.1093/mp/ssr079
Construction, characterization, and preliminary BAC-end sequence analysis of a bacterial artificial chromosome library of the tea plant (Camellia sinensis) 10.1155/2011/476723
Genome studies and molecular genetics: Understanding the functional genome based on the rice model 10.1016/j.pbi.2013.04.003
Efficacy of clone fingerprinting methodologies 10.1016/j.ygeno.2006.08.008
Construction of a nurse shark (Ginglymostoma cirratum) bacterial artificial chromosome (BAC) library and a preliminary genome survey 10.1186/1471-2164-7-106
A draft physical map of a D-genome cotton species (Gossypium raimondii) 10.1186/1471-2164-11-395
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization 10.1104/pp.103.034538
Species trees from highly incongruent gene trees in rice 10.1093/sysbio/syp054
Dynamic intra-japonica subspecies variation and resource application 10.1093/mp/ssr085
BAC library development and clone characterization for dormancy-responsive DREB4A, DAM, and FT from leafy spurge (Euphorbia esula) identifies differential splicing and conserved promoter motifs 10.1614/WS-D-12-00175.1
Fifteen million years of evolution in the Oryza genus shows extensive gene family expansion 10.1093/mp/sst149
Comparison of peach and Arabidopsis genomic sequences: Fragmentary conservation of gene neighborhoods 10.1139/g03-004
Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63 10.1073/pnas.1611012113
Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data 10.1038/sdata.2016.76
DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses 10.1038/ncomms12790
Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences 10.1093/bioinformatics/btw370
Development and validation of cross-transferable and polymorphic DNA markers for detecting alien genome introgression in Oryza sativa from Oryza brachyantha 10.1007/s00438-016-1214-z
The impact and origin of copy number variations in the Oryza species 10.1186/s12864-016-2589-2
Aflatoxin-free transgenic maize using host-induced gene silencing 10.1126/sciadv.1602382
The asparagus genome sheds light on the origin and evolution of a young Y chromosome 10.1038/s41467-017-01064-8
Comparison of Oryza sativa and Oryza brachyantha Genomes Reveals Selection-Driven Gene Escape from the Centromeric Regions 10.1105/tpc.18.00163
The wild relative of Rice: Genomes and genomics 10.1007/978-1-4614-7903-1_2
Genome and evolution of the shade-requiring medicinal herb Panax ginseng 10.1111/pbi.12926
Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti 10.1073/pnas.1706367114
Access to the maize genome: An integrated physical and genetic map 10.1104/pp.010953
Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice 10.1111/pbi.12674
Rice SNP-seek database update: New SNPs, indels, and queries 10.1093/nar/gkw1135
The Rice Annotation Project Database (RAP-DB): 2008 update 10.1093/nar/gkm978
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza 10.1038/s41588-018-0040-0
A single-nucleotide polymorphism causes smaller grain size and loss of seed shattering during African rice domestication 10.1038/nplants.2017.64
Genotyping by sequencing of rice interspecific backcross inbred lines identifies QTLs for grain weight and grain length 10.1007/s10681-018-2119-1
Genetic control of seed shattering during African rice domestication 10.1038/s41477-018-0164-3
Tracing ancestor rice of Suriname Maroons back to its African origin 10.1038/nplants.2016.149
The Dark Side of the Genome: Revealing the Native Transposable Element/Repeat Content of Eukaryotic Genomes 10.1016/j.molp.2016.09.006
The Cardamine hirsuta genome offers insight into the evolution of morphological diversity 10.1038/nplants.2016.167
Young inversion with multiple linked QTLs under selection in a hybrid zone 10.1038/s41559-017-0119
The rice paradox: Multiple origins but single domestication in Asian Rice 10.1093/molbev/msx049
Erratum to: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza (Nature Genetics, (2018), 50, 2, (285-296), 10.1038/s41588-018-0040-0) 10.1038/s41588-018-0261-2
Genomic variation in 3,010 diverse accessions of Asian cultivated rice 10.1038/s41586-018-0063-9
Evolutionary analysis of the SUB1 locus across the Oryza genomes 10.1186/s12284-016-0140-3
Genetic variation for domestication-related traits revealed in a cultivated rice, Nipponbare (Oryza sativa ssp. japonica) × ancestral rice, O. nivara, mapping population 10.1007/s11032-017-0734-5
The rice genome revolution: From an ancient grain to Green Super Rice 10.1038/s41576-018-0024-z
Genome-wide association mapping of date palm fruit traits. 10.1038/s41467-019-12604-9
Structural variants in 3000 rice genomes 10.1101/gr.241240.118
Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian rice 10.1101/2019.12.29.888347
Machine Learning Reveals Spatiotemporal Genome Evolution in Asian Rice Domestication 10.1101/829168
Mitochondrial plastid DNA can cause DNA barcoding paradox in plants 10.1038/s41598-020-63233-y
A platinum standard pan-genome resource that represents the population structure of Asian rice 10.1038/s41597-020-0438-2
Evolutionary Dynamics of Abundant 7-bp Satellites in the Genome of Drosophila virilis 10.1093/molbev/msaa010
Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K) 10.1093/gigascience/giaa080
A platinum standard pan-genome resource that represents the population structure of Asian rice 10.6084/m9.figshare.c.4816266.v1
Fish10K Pilot Project Data 10.5524/100661
Potential of Platinum Standard Reference Genomes to Exploit Natural Variation in the Wild Relatives of Rice 10.3389/fpls.2020.579980
Evolution and diversification of reproductive phased small interfering RNAs in Oryza species 10.1111/nph.17035
The gap-free rice genomes provide insights for centromere structure and function exploration and graph-based pan-genome construction 10.1101/2020.12.24.424073
A route to de novo domestication of wild allotetraploid rice. 10.1016/j.cell.2021.01.013
The chromosome-scale reference genome of safflower (Carthamus tinctorius) provides insights into linoleic acid and flavonoid biosynthesis 10.1111/pbi.13586
Author Correction: Mitochondrial plastid DNA can cause DNA barcoding paradox in plants 10.1038/s41598-021-89266-5
Daniel Park
Park Daniel
ORCID: 0000-0003-2783-530X
Why close relatives make bad neighbours: phylogenetic conservatism in niche preferences and dispersal disproves Darwin's naturalization hypothesis in the thistle tribe 10.1111/mec.13227
A reciprocal test of Darwin's naturalization hypothesis in two mediterranean-climate regions 10.1111/geb.12352
Native Environment Modulates Leaf Size and Response to Simulated Foliar Shade across Wild Tomato Species 10.1371/journal.pone.0029570
CrowdCurio: an online crowdsourcing platform to facilitate climate change studies using herbarium specimens 10.1111/nph.14535
A test of Darwin's naturalization hypothesis in the thistle tribe shows that close relatives make bad neighbors 10.1073/pnas.1309948110
Implications and alternatives of assigning climate data to geographical centroids 10.1111/jbi.13029
Selfing species exhibit diminished niche breadth over time 10.1101/157974
Widespread sampling biases in herbaria revealed from large-scale digitization 10.1101/165480
Understanding the Processes Underpinning Patterns of Phylogenetic Regionalization 10.1016/j.tree.2017.08.013
Taxon sampling effects on the quantification and comparison of community phylogenetic diversity 10.1111/mec.14520
MADA: Malagasy Animal trait Data Archive 10.1002/ecy.2167
Widespread sampling biases in herbaria revealed from large-scale digitization 10.1111/nph.14855
Mating system does not predict niche breath 10.1111/geb.12740
Anthropogenic threats can have cascading homogenizing effects on the phylogenetic and functional diversity of tropical ecosystems 10.1111/ecog.03825
Spatial overlaps between the global protected areas network and terrestrial hotspots of evolutionary diversity 10.1111/geb.12888
A checklist for maximizing reproducibility of ecological niche models 10.1038/s41559-019-0972-5
Darwin’s naturalization conundrum can be explained by spatial scale 10.1073/pnas.1918100117
Machine learning predicts large scale declines in native plant phylogenetic diversity 10.1111/nph.16621
The Invisible University Is COVID-19 Positive 10.1016/j.tig.2020.05.010
An invasive species spread by threatened diurnal lemurs impacts rainforest structure in Madagascar 10.1007/s10530-020-02293-7
Phenological displacement is uncommon among sympatric angiosperms 10.1101/2020.08.04.236935
A prickly puzzle: Generic delimitations in the Carduus ‐ Cirsium group (Compositae: Cardueae: Carduinae) 10.1002/tax.12288
A New Method for Counting Reproductive Structures in Digitized Herbarium Specimens Using Mask R-CNN 10.3389/fpls.2020.01129
A standard protocol for reporting species distribution models 10.1111/ecog.04960
The role of nocturnal omnivorous lemurs as seed dispersers in Malagasy rain forests 10.1111/btp.12789
Digitization and the future of natural history collections 10.7287/peerj.preprints.27859
Digitization and the future of natural history collections 10.7287/peerj.preprints.27859v1
Open Science principles for accelerating trait-based science across the Tree of Life 10.1038/s41559-020-1109-6
30% land conservation and climate action reduces tropical extinction risk by more than 50% 10.1111/ecog.05166
The commonness of rarity: Global and future distribution of rarity across land plants 10.1126/sciadv.aaz0414
Assessing Plant Phenological Patterns in the Eastern United States Over the Last 120 Years 10.6073/PASTA/F6AFA728BB5EDFD79F458D7D5E23F559
Collinearity in ecological niche modeling: Confusions and challenges 10.1002/ece3.5555
Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers 10.3897/rio.4.e32449
Genome and evolution of the shade-requiring medicinal herbPanax ginseng 10.1111/pbi.12926
Data from: MADA: Malagasy Animal trait Data Archive 10.5061/DRYAD.44TT0
Crops in a Changing World: Hidden Forest-Agriculture Teleconnections 10.17011/conference/eccb2018/107551
Polyploidy and introgression in invasive giant knotweed (Fallopia sachalinensis) during the colonization of remote volcanic islands 10.1038/s41598-018-34025-2
Disentangling the effects of climate change, landscape heterogeneity, and scale on phenological metrics 10.1101/2021.02.05.429398
Scale gaps in landscape phenology: challenges and opportunities 10.1016/j.tree.2021.04.008
Where we've been and where we're going: the importance of source communities in predicting establishment success from phylogenetic relationships 10.1111/ecog.05406
Source range phylogenetic community structure can predict the outcome of avian introductions 10.1101/2021.05.17.444023
How deregulation, drought and increasing fire impact Amazonian biodiversity 10.1038/s41586-021-03876-7
Nomar Waminal
Waminal Nomar
ORCID: 0000-0001-5119-152X
Comprehensive comparative analysis of chloroplast genomes from seven Panax species and development of an authentication system based on species-unique single nucleotide polymorphism markers 10.1016/j.jgr.2018.06.003
Genomic survey of the hidden components of the B. rapa genome 10.1007/978-3-662-47901-8_7
FISH mapping of rDNA and telomeric repeats in 10 Senna species 10.1007/s13580-018-0115-y
Erratum: Detection of transgenes in three genetically modified rice lines by fluorescence in situ hybridization (Genes & Genomics (2010) 32 (527-531) DOI: 10.1007/s13258-010-0064-z) 10.1007/s13258-011-1001-5
Re-exploration of U's Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences 10.1038/s41598-018-25585-4
Genome and evolution of the shade-requiring medicinal herb Panax ginseng 10.1111/pbi.12926
FISH karyotype comparison between wild and cultivated Perilla species using 5S and 45S rDNA probes 10.9787/PBB.2019.7.3.237
Pre-labelled oligo probe-FISH karyotype analyses of four Araliaceae species using rDNA and telomeric repeat 10.1007/s13258-019-00786-x
Cytogenetic analyses revealed different genome rearrangement footprints in four ×Brassicoraphanus lines with different fertility rates 10.9787/PBB.2019.7.2.95
Randomly Detected Genetically Modified (GM) Maize (Zea mays L.) near a Transport Route Revealed a Fragile 45S rDNA Phenotype 10.1371/journal.pone.0074060
The brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes 10.1038/ncomms4930
In silico mining and FISH mapping of a chromosome-specific satellite DNA in Capsicum annuum L. 10.1007/s13258-019-00832-8
Genetic diversity among cultivated and wild Panax ginseng populations revealed by high-resolution microsatellite markers 10.1016/j.jgr.2019.05.008
Dual-color FISH karyotype and rDNA distribution analyses on four Cucurbitaceae species 10.1007/s13580-012-0105-4
Karyotypes of three exotic cucurbit species based on triple-color FISH analysis 10.12972/kjhst.20180041
Phylogenetic relationship of 40 species of genus Aloe L. and the origin of an allodiploid species revealed by nucleotide sequence variation in chloroplast intergenic space and cytogenetic in situ hybridization 10.1007/s10722-015-0243-5
Phylogeny of Cucurbitaceae species in Korea based on 5S rDNA non-transcribed spacer 10.1007/s13258-013-0141-1
Detection of transgenes in three genetically modified rice lines by fluorescence in situ hybridization 10.1007/s13258-010-0064-z
Rapid and efficient fish using pre-labeled oligomer probes 10.1038/s41598-018-26667-z
Major repeat components covering one-third of the ginseng (Panax ginseng C.A. Meyer) genome and evidence for allotetraploidy 10.1111/tpj.12441
Karyotype analysis of Panax ginseng C.A.Meyer, 1843 (Araliaceae) based on rDNA loci and DAPI band distribution 10.3897/CompCytogen.v6i4.3740
A refined Panax ginseng karyotype based on an ultra-high copy 167-bp tandem repeat and ribosomal DNAs 10.1016/j.jgr.2016.08.002
FISH karyotype analysis of four wild cucurbitaceae species using 5S and 45S rDNA probes and the emergence of new polyploids in trichosanthes kirilowii maxim 10.7235/hort.2015.15101
Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution 10.1038/s41598-017-18048-9
Fluorescence in situ hybridization karyotype analysis of seven Platycodon grandiflorum (Jacq.) A. DC. cultivars 10.12972/kjhst.20170082
FISH karyotype and GISH meiotic pairing analyses of a stable intergeneric hybrid xBrassicoraphanus line BB#5 10.7235/hort.2015.14151
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species 10.1038/srep15655
Characterization of chromosome-specific microsatellite repeats and telomere repeats based on low coverage whole genome sequence reads in Panax ginseng 10.9787/PBB.2018.6.1.74
Triple-color FISH karyotype analysis of four korean wild cucurbitaceae species 10.12972/kjhst.20180011
Rapid amplification of four retrotransposon families promoted speciation and genome size expansion in the genus Panax 10.1038/s41598-017-08194-5
Subgenome Discrimination in Brassica and Raphanus Allopolyploids Using Microsatellites 10.3390/cells10092358
Murukarthick Jayakodi
Jayakodi Murukarthick
ORCID: 0000-0003-2951-0541
A web accessible resource for investigating cassava phenomics and genomics information: BIOGEN BASE 10.6026/97320630006391
Comprehensive analysis of Panax ginseng root transcriptomes 10.1186/s12870-015-0527-0
Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map 10.1186/1471-2164-15-149
Genome-wide characterization of long intergenic non-coding RNAs (lincRNAs) provides new insight into viral diseases in honey bees Apis cerana and Apis mellifera 10.1186/s12864-015-1868-7
The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae) 10.1080/23802359.2015.1137832
Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots 10.1016/j.jgr.2014.05.008
Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea 10.1371/journal.pone.0094499
Integrated Transcriptomic and Metabolomic Analysis of Five Panax ginseng Cultivars Reveals the Dynamics of Ginsenoside Biosynthesis 10.3389/fpls.2017.01048
BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species 10.1186/1756-0500-7-379
Paithumbase - Biometrical Traits based Query System for Studying Mungbean [Vigna radiata (L. ) Wilczek] Phenomics 10.5120/ijais12-450819
Comparative analysis of the transcriptomes and primary metabolite profiles of adventitious roots of five Panax ginseng cultivars. 10.1016/j.jgr.2015.12.012
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. 10.1038/srep15655
Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage. 10.1186/s12870-015-0424-6
Transcriptome analysis reveals in vitro cultured Withania somnifera leaf and root tissues as a promising source for targeted withanolide biosynthesis. 10.1186/s12864-015-1214-0
Genome and evolution of the shade-requiring medicinal herb Panax ginseng. 10.1111/pbi.12926
A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform 10.9787/pbb.2017.5.1.025
Ginseng Genome Database: an open-access platform for genomics of Panax ginseng 10.1186/s12870-018-1282-9
Re-exploration of U's Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences. 10.1038/s41598-018-25585-4
Rapid and Efficient FISH using Pre-Labeled Oligomer Probes 10.1038/s41598-018-26667-z
Discrimination and Authentication of Eclipta prostrata and E. alba Based on the Complete Chloroplast Genomes 10.9787/pbb.2017.5.4.334
The Complete Chloroplast Genome Sequence and Intra-Species Diversity of Rhus chinensis 10.9787/pbb.2017.5.3.243
A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform 10.9787/pbb.2017.5.1.25
Authentication of Golden-Berry P. ginseng Cultivar ‘Gumpoong’ from a Landrace ‘Hwangsook’ Based on Pooling Method Using Chloroplast-Derived Markers 10.9787/pbb.2017.5.1.16
Comparative transcriptome analysis of heat stress responsiveness between two contrasting ginseng cultivars 10.1016/j.jgr.2018.05.007
Identification of candidate UDP-glycosyltransferases involved in protopanaxadiol-type ginsenoside biosynthesis in Panax ginseng 10.1038/s41598-018-30262-7
Genetic diversity in the barnyard millet (Echinochola frumentacea) germplasms revealed by morphological traits and simple sequence repeat markers 10.1016/j.cpb.2018.09.006
Transcriptomes of Indian barnyard millet and barnyardgrass reveal putative genes involved in drought adaptation and micronutrient accumulation 10.1007/s11738-019-2855-4
QTL mapping in Vigna radiata × Vigna umbellata population uncovers major genomic regions associated with bruchid resistance 10.1007/s11032-019-1006-3
Detection of QTLs associated with mungbean yellow mosaic virus (MYMV) resistance using the interspecific cross of Vigna radiata × Vigna umbellata 10.1007/s13353-019-00506-x
Identification of consistent QTL with large effect on anther extrusion in doubled haploid populations developed from spring wheat accessions in German Federal ex situ Genebank 10.1007/s00122-019-03404-2
Sweet genes in melon and watermelon 10.1038/s41588-019-0529-1
Mitochondrial plastid DNA can cause DNA barcoding paradox in plants 10.1038/s41598-020-63233-y
The barley pan-genome reveals the hidden legacy of mutation breeding 10.1038/s41586-020-2947-8
Building pan-genome infrastructures for crop plants and their use in association genetics 10.1093/dnares/dsaa030
The reinvention of potato 10.1038/s41422-021-00542-5
Genomic Resources for Ginseng Genome Studies 10.1007/978-3-030-30347-1_11
Ginseng Genome Structure and Evolution 10.1007/978-3-030-30347-1_7
Mining of Miniature Transposable Elements in Brassica Species at BrassicaTED. 10.1007/978-1-0716-1134-0_5
Author Correction: Mitochondrial plastid DNA can cause DNA barcoding paradox in plants. 10.1038/s41598-021-89266-5
sampath perumal
perumal sampath / sampath
ORCID: 0000-0003-3403-1625
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. 10.1038/srep15655
Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage. 10.1186/s12870-015-0424-6
Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map. 10.1186/1471-2164-15-149
BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species. 10.1186/1756-0500-7-379
The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes. 10.1038/ncomms4930
Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea. 10.1371/journal.pone.0094499
Microsatellite-based analysis of genetic diversity in 91 commercial Brassica oleracea L. cultivars belonging to six varietal groups 10.1007/s10722-013-9966-3
Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome. 10.1186/1471-2229-13-56
Comparative analysis of Cassandra TRIMs in three Brassicaceae genomes 10.1017/S1479262114000446
The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae) 10.1080/23802359.2015.1137832
Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleraceaL.) 10.1093/dnares/dsv034
Repeat Evolution in Brassica rapa (AA), B. oleracea (CC), and B. napus (AACC) Genomes 10.9787/pbb.2016.4.2.107
Next-Generation Sequencing Based Transposon Display to Detect High-Throughput Insertion Polymorphism Markers in Brassica 10.9787/pbb.2016.4.3.285
Rapid amplification of four retrotransposon families promoted speciation and genome size expansion in the genus Panax 10.1038/s41598-017-08194-5
Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution 10.1038/s41598-017-18048-9
Diversity and Evolution of B. napus Chloroplast Genome 10.1007/978-3-319-43694-4_10
Quantity, Distribution, and Evolution of Major Repeats in Brassica napus 10.1007/978-3-319-43694-4_6
Re-exploration of U’s Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences 10.1038/s41598-018-25585-4
Genome and evolution of the shade-requiring medicinal herbPanax ginseng 10.1111/pbi.12926
Transcriptomes of Indian barnyard millet and barnyardgrass reveal putative genes involved in drought adaptation and micronutrient accumulation 10.1007/s11738-019-2855-4
Seungill Kim
Kim Seungill
ORCID: 0000-0001-6287-8693
TGFam-Finder: An optimal solution for target-gene family annotation in eukaryotic genomes 10.1101/372433
Global gene expression profiling for fruit organs and pathogen infections in the pepper, Capsicum annuum L. 10.1038/sdata.2018.103
De Novo Transcriptome Analysis to Identify Anthocyanin Biosynthesis Genes Responsible for Tissue-Specific Pigmentation in Zoysiagrass (Zoysia japonica Steud.) 10.1371/journal.pone.0124497
Correction: De Novo Transcriptome Analysis to Identify Anthocyanin Biosynthesis Genes Responsible for Tissue-Specific Pigmentation in Zoysiagrass (Zoysia japonica Steud.) 10.1371/journal.pone.0137943
Genome-Wide Comparative Analyses Reveal the Dynamic Evolution of Nucleotide-Binding Leucine-Rich Repeat Gene Family among Solanaceae Plants 10.3389/fpls.2016.01205
Trichome density of main stem is tightly linked to PepMoV resistance in chili pepper (Capsicum annuum L.) 10.1007/s00122-010-1510-7
Comparative analysis of pepper and tomato reveals euchromatin expansion of pepper genome caused by differential accumulation of Ty3/Gypsy-like elements 10.1186/1471-2164-12-85
Major Quantitative Trait Loci and Putative Candidate Genes for Powdery Mildew Resistance and Fruit-Related Traits Revealed by an Intraspecific Genetic Map for Watermelon (Citrullus lanatus var. lanatus) 10.1371/journal.pone.0145665
The Hot Pepper (Capsicum annuum) MicroRNA Transcriptome Reveals Novel and Conserved Targets: A Foundation for Understanding MicroRNA Functional Roles in Hot Pepper 10.1371/journal.pone.0064238
SNUGB: a versatile genome browser supporting comparative and functional fungal genomics 10.1186/1471-2164-9-586
New role of LTR-retrotransposons for emergence and expansion of disease-resistance genes and high-copy gene families in plants 10.5483/bmbrep.2018.51.2.010
Genome-wide analysis of Dof transcription factors reveals functional characteristics during development and response to biotic stresses in pepper 10.1038/srep33332
Evolution of the large genome in Capsicum annuum occurred through accumulation of single-type long terminal repeat retrotransposons and their derivatives 10.1111/j.1365-313x.2011.04851.x
Genome analysis ofHibiscus syriacusprovides insights of polyploidization and indeterminate flowering in woody plants 10.1093/dnares/dsw049
Expansion of sesquiterpene biosynthetic gene clusters in pepper confers nonhost resistance to the Irish potato famine pathogen 10.1111/nph.14637
Genome and evolution of the shade-requiring medicinal herb Panax ginseng 10.1111/pbi.12926
An ultra-high-density bin map facilitates high-throughput QTL mapping of horticultural traits in pepper (Capsicum annuum) 10.1093/dnares/dsv038
New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication 10.1186/s13059-017-1341-9
Multiple reference genome sequences of hot pepper reveal the massive evolution of plant disease resistance genes by retroduplication 10.1101/115410
Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species 10.1038/ng.2877
Divergent evolution of multiple virus-resistance genes from a progenitor inCapsicumspp. 10.1111/nph.14177
Comparative Analysis of Re-Annotated Genes Provides Insight into Evolutionary Divergence and Expressions of Aquaporin Family in Pepper 10.3390/plants10061039
Optimization of Protein Isolation and Label-Free Quantitative Proteomic Analysis in Four Different Tissues of Korean Ginseng 10.3390/plants10071409
Youn-Il Park
Park Youn-Il
ORCID: 0000-0003-2912-2821
Breaking the Kranz paradigm in terrestrial C4 plants: Does it hold promise for C4 rice? 10.1142/9789812709523_0015
The mitochondrial pentatricopeptide repeat protein PPR19 is involved in the stabilization of NADH dehydrogenase 1 transcripts and is crucial for mitochondrial function and Arabidopsis thaliana development 10.1111/nph.14528
Mitochondria Provide the Main Source of Cytosolic ATP for Activation of Outward-rectifying K+ Channels in Mesophyll Protoplast of Chlorophyll-deficient Mutant Rice (OsCHLH) Seedlings 10.1074/jbc.M309071200
Impaired function of the tonoplast-localized sucrose transporter in rice, OsSUT2, limits the transport of vacuolar reserve sucrose and affects plant growth 10.1104/pp.111.176982
Sucrose transport from source to sink seeds in rice 10.1111/j.1399-3054.2006.00654.x
A new Arctic Chlorella species for biodiesel production 10.1016/j.biortech.2012.09.026
Lilium Pollen opto-perforation by ultrashort laser pulse 10.1109/CLEOPR.2007.4391358
Phytochrome and ethylene signaling integration in Arabidopsis occurs via the transcriptional regulation of genes co-targeted by PIFs and EIN3 10.3389/fpls.2016.01055
The role of Slr1443 in pilus biogenesis in Synechocystis sp. PCC 6803: Involvement in post-translational modification of pilins 10.1016/j.bbrc.2004.01.036
The grand design of photosynthesis: Acclimation of the photosynthetic apparatus to environmental cues 10.1007/BF00020423
Chloroplast Cu/Zn-superoxide dismutase is a highly sensitive site in cucumber leaves chilled in the light 10.1007/s00425-002-0852-z
CP43′, the isiA gene product, functions as an excitation energy dissipator in the cyanobacterium Synechococcus sp. PCC 7942 10.1562/0031-8655(2001)074<0431:CTIGPF>2.0.CO;2
RNA deadenylation and decay in plants 10.1007/s12374-013-0201-8
Editorial: Biotechnology of microalgae, based on molecular biology and biochemistry of eukaryotic algae and cyanobacteria 10.3389/fmicb.2017.00118
Rice phot1a mutation reduces plant growth by affecting photosynthetic responses to light during early seedling growth 10.1007/s11103-008-9442-1
Expression of the isiA gene is essential for the survival of the cyanobacterium Synechococcus sp. PCC 7942 by protecting photosystem II from excess light under iron limitation 10.1046/j.1365-2958.1999.01332.x
Characterization of high temperature-tolerant strains of Pyropia yezoensis 10.1007/s11816-018-0499-2
Cyanobacterial glucokinase complements the glucose sensing role of Arabidopsis thaliana hexokinase 1 10.1016/j.bbrc.2008.07.041
Photoinactivation and photoprotection of photosystem II in nature 10.1034/j.1399-3054.1997.1000202.x
Calcium dependent sucrose uptake links sugar signaling to anthocyanin biosynthesis in Arabidopsis 10.1016/j.bbrc.2012.11.100
Differential susceptibility of Photosystem II to light stress in light-acclimated pea leaves depends on the capacity for photochemical and non-radiative dissipation of light 10.1016/0168-9452(96)04339-7
Heterologous expression of IbMYB1a by different promoters exhibits different patterns of anthocyanin accumulation in tobacco 10.1016/j.plaphy.2015.02.002
Iron deficiency in cyanobacteria causes monomerization of photosystem I trimers and reduces the capacity for state transitions and the effective absorption cross section of photosystem I in vivo 10.1104/pp.106.082339
Current status and perspectives of genome editing technology for microalgae 10.1186/s13068-017-0957-z
Iron stress restricts photosynthetic intersystem electron transport in Synechococcus sp. PCC 7942 10.1016/S0014-5793(00)02211-0
Functional conservation of a root hair cell-specific cis-element in angiosperms with different root hair distribution patterns 10.1105/tpc.106.045229
Photoinactivation of functional photosystem II and D1-protein synthesis in vivo are independent of the modulation of the photosynthetic apparatus by growth irradiance 10.1007/BF00206257
CO2-concentrating mechanism in cyanobacterial photosynthesis: Organization, physiological role, and evolutionary origin 10.1007/s11120-013-9860-z
Cell growth defect factor1/CHAPERONE-LIKE PROTEIN OF POR1 plays a role in stabilization of light-dependent protochlorophyllide oxidoreductase in Nicotiana benthamiana and Arabidopsis 10.1105/tpc.113.111096
Overexpression of stearoyl-ACP desaturase enhances accumulations of oleic acid in the green alga Chlamydomonas reinhardtii 10.1007/s11816-013-0302-3
Iron stress responses in the cyanobacterium Synechococcus sp. PCC7942 10.1034/j.1399-3054.2002.1160216.x
Ethylene suppression of sugar-induced anthocyanin pigmentation in arabidopsis 10.1104/pp.110.161869
DNA gyrase is involved in chloroplast nucleoid partitioning 10.1105/tpc.104.024281
Transcriptional Regulation of Cellulose Biosynthesis during the Early Phase of Nitrogen Deprivation in Nannochloropsis salina 10.1038/s41598-017-05684-4
Quantifying and monitoring functional photosystem II and the stoichiometry of the two photosystems in leaf segments: Approaches and approximations 10.1007/s11120-012-9740-y
Threonine 286 of fatty acid desaturase 7 is essential for ω-3 fatty acid desaturation in the green microalga Chlamydomonas reinhardtii 10.3389/fmicb.2015.00066
Transcriptome Profiling and Characterization of Drought-Tolerant Potato Plant (Solanum tuberosum L.) 10.14348/molcells.2018.0312
The senescence-induced staygreen protein regulates chlorophyll degradation 10.1105/tpc.106.044891
The role of inactive photosystem-II-mediated quenching in a last-ditch community defence against high light stress in vivo 10.1098/rstb.2002.1145
Improvement of biomass accumulation of potato plants by transformation of cyanobacterial photorespiratory glycolate catabolism pathway genes 10.1007/s11816-016-0403-x
Stable plastid transformation in Nicotiana benthamiana 10.1007/s12374-009-9023-0
A wheat R2R3-MYB protein PURPLE PLANT1 (TaPL1) functions as a positive regulator of anthocyanin biosynthesis 10.1016/j.bbrc.2015.12.001
Transgenic plants with cyanobacterial genes 10.1007/s11816-009-0100-0
Chloroplast Movement in the Shade Plant Tradescantia albiflora Helps Protect Photosystem II against Light Stress 10.1104/pp.111.3.867
Role of a novel photosystem II-associated carbonic anhydrase in photosynthetic carbon assimilation in Chlamydomonas reinhardtii 10.1016/S0014-5793(99)00037-X
Light inactivation of functional photosystem II in leaves of peas grown in moderate light depends on photon exposure 10.1007/BF00203636
Sugar-hormone cross-talk in anthocyanin biosynthesis. 10.1007/s10059-012-0151-x
Preferential expression of cell elongation-related genes in leaves of the new elite wheat line Iksan370 with large spikes 10.1007/s11816-015-0347-6
Chlorosis of Ogura-CMS Brassica rapa is due to down-regulation of genes for chloroplast proteins 10.5010/JPB.2017.44.2.115
Dicistronic expression of the green fluorescent protein and antibiotic resistance genes in the plastid for selection and tracking of plastid-transformed cells in tobacco 10.1007/s00299-003-0740-4
A large population of small chloroplasts in tobacco leaf cells allows more effective chloroplast movement than a few enlarged chloroplasts 10.1104/pp.000588
A novel α-type carbonic anhydrase associated with the thylakoid membrane in Chlamydomonas reinhardtii is required for growth at ambient CO2 10.1093/emboj/17.5.1208
Role of the plastidic glucose translocator in the export of starch degradation products from the chloroplasts in Arabidopsis thaliana 10.1111/j.1469-8137.2010.03580.x
Regulation of Dark-Induced Stomatal Closure in Arabidopsis Dynamin-Like Protein 1E (adl1e) Mutant Leaves 10.1007/s12374-011-9149-8
Role of the rice hexokinases OsHXK5 and OsHXK6 as glucose sensors 10.1104/pp.108.131227
Stable expression of a fungal laccase protein using transplastomic tobacco 10.1007/s11816-012-0225-4
Differential expression in response to biotic and abiotic stress from three potato glutaredoxins induced during suberization 10.1007/BF03030611
An episomal vector system for plastid transformation in higher plants 10.1007/s11816-015-0381-4
Glucose-induced expression of carotenoid biosynthesis genes in the dark is mediated by cytosolic pH in the cyanobacterium Synechocystis sp. PCC 6803 10.1074/jbc.M402541200
SIPMEI, a pollen-specific gene in tomato 10.4141/CJPS2013-084
Unifying model for the photoinactivation of Photosystem II in vivo under steady-state photosynthesis 10.1023/A:1005946808488
Acute exposure to UV-B sensitizes cucumber, tomato,and Arabidopsis plants to photooxidative stressby inhibiting thermal energy dissipation and antioxidant defense 10.1269/jrr.10133
An Arabidopsis divergent pumilio protein, APUM24, is essential for embryogenesis and required for faithful pre-rRNA processing 10.1111/tpj.13745
Identification of genes that may regulate the expression of the transcription factor production of anthocyanin pigment 1 (PAP1)/MYB75 involved in Arabidopsis anthocyanin biosynthesis 10.1007/s00299-015-1743-7
Constitutive activation of brassinosteroid signaling in the Arabidopsis elongated-D/bak1 mutant 10.1007/s11103-012-9963-5
The quantum yield of photoinactivation of photosystem II in pea leaves is greater at low than high photon exposure 10.1093/oxfordjournals.pcp.a078863
Molecular cloning and functional analysis of serotonin N-acetyltransferase from the cyanobacterium Synechocystis sp. PCC 6803 10.1111/jpi.12080
Photosynthesis-dependent anthocyanin pigmentation in arabidopsis 10.4161.psb.6.1.14082
Expression of cucumber LOX genes in response to powdery mildew and defense-related signal molecules 10.4141/CJPS-2014-013
Plant receptor kinases bind and phosphorylate 14-3-3 proteins 10.1007/s13258-016-0468-5
Extended leaf longevity in the ore4-1 mutant of Arabidopsis with a reduced expression of a plastid ribosomal protein gene 10.1046/j.1365-313X.2002.01355.x
Robustness and time-scale hierarchy in biological systems 10.1016/S0303-2647(98)00092-6
Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp. PCC 6803 10.1073/pnas.1104242108
Astaxanthin production by a highly photosensitive Haematococcus mutant 10.1016/j.procbio.2012.07.007
APUM23, a nucleolar Puf domain protein, is involved in pre-ribosomal RNA processing and normal growth patterning in Arabidopsis 10.1111/j.1365-313X.2010.04393.x
Translocation of phospholipase A2α to apoplasts is modulated by developmental stages and bacterial infection in Arabidopsis 10.3389/fpls.2012.00126
Loss of cytosolic fructose-1,6-bisphosphatase limits photosynthetic sucrose synthesis and causes severe growth retardations in rice (Oryza sativa) 10.1111/j.1365-3040.2008.01890.x
Mitochondrial activity in illuminated leaves of chlorophyll-deficient mutant rice (OsCHLH) seedlings 10.1007/s11816-010-0146-z
A comparative synteny analysis tool for target-gene SNP marker discovery: Connecting genomics data to breeding in Solanaceae 10.1093/database/bay047
The induction of CP43′ by iron-stress in Synechococcus sp. PCC 7942 is associated with carotenoid accumulation and enhanced fatty acid unsaturation 10.1016/j.bbabio.2007.02.006
S1 domain-containing STF modulates plastid transcription and chloroplast biogenesis in Nicotiana benthamiana 10.1111/j.1469-8137.2011.03941.x
Genomic survey and biochemical analysis of recombinant candidate cyanobacteriochromes reveals enrichment for near UV/violet sensors in the halotolerant and alkaliphilic cyanobacterium microcoleus IPPAS B353 10.1074/jbc.M115.669150
Genome and evolution of the shade-requiring medicinal herb Panax ginseng 10.1111/pbi.12926
Salinity-dependent changes in growth and fatty acid composition of new Arctic Chlamydomonas species, ArM0029A 10.1007/s11240-014-0655-5
Formation of superhydrophobic poly(dimethysiloxane) by ultrafast laser-induced surface modification 10.1364/OE.16.012715
Specific features of the system of carbonic anhydrases of alkaliphilic cyanobacteria 10.1134/S1021443713040079
Hydrophobic residues near the bilin chromophore-binding pocket modulate spectral tuning of insert-cys subfamily cyanobacteriochromes 10.1038/srep40576
Transcriptional regulation of the respiratory genes in the cyanobacterium Synechocystis sp. PCC 6803 during the early response to glucose feeding 10.1104/pp.107.105023
Pumilio puf domain RNA-binding proteins in Arabidopsis 10.4161/psb.6.3.14380
Femtosecond-laser-assisted optoperforation of the primary retinal blood vessels and the retina tissue of porcine eyes 10.3938/jkps.55.467
Host-dependent suppression of RNA silencing mediated by the viral suppressor p19 in potato 10.1007/s00425-011-1465-1
Identification of a pollen-specific gene, SlCRK1 (RFK2) in tomato 10.1007/s13258-013-0168-3
Overexpressing the wheat dihydroflavonol 4-reductase gene TaDFR increases anthocyanin accumulation in an arabidopsis dfr mutant 10.1007/s13258-015-0373-3
Analysis of a triose phosphate/phosphate translocator-deficient mutant reveals a limited capacity for starch synthesis in rice leaves 10.1093/mp/ssu082
The complete genome of a cyanobacterium from a soda lake reveals the presence of the components of CO 2 -concentrating mechanism 10.1007/s11120-016-0235-0
Target theory and the photoinactivation of photosystem II 10.1007/BF00018219
Electron transport to oxygen mitigates against the photoinactivation of photosystem II in vivo 10.1007/BF00018218
ctr1, a gene involved in a signal transduction pathway of the gliding motility in the cyanobacterium Synechocystis sp. PCC 6803 10.1016/S0014-5793(01)02227-X
Plant synthetic GP4 and GP5 proteins from porcine reproductive and respiratory syndrome virus elicit immune responses in pigs 10.1007/s00425-017-2836-z
Restricted capacity for PSI-dependent cyclic electron flow in ΔpetE mutant compromises the ability for acclimation to iron stress in Synechococcus sp. PCC 7942 cells 10.1016/j.bbabio.2012.03.014
Structure, expression, and mapping of two nodule-specific genes identified by mining public soybean EST databases 10.1016/j.gene.2006.07.015
HY5 regulates anthocyanin biosynthesis by inducing the transcriptional activation of the MYB75/PAP1 transcription factor in Arabidopsis 10.1016/j.febslet.2013.03.037
Tyrosine phosphorylation as a signaling component for plant improvement 10.5010/JPB.2015.42.4.277
Cytokinins enhance sugar-induced anthocyanin biosynthesis in Arabidopsis 10.1007/s10059-012-0114-2
Transcript accumulation of carotenoid biosynthesis genes in the cyanobacterium Synechocystis sp. PCC 6803 during the dark-to-light transition is mediated by photosynthetic electron transport 10.1007/s11816-010-0130-7
Elevated inorganic carbon concentrating mechanism confers tolerance to high light in an arctic chlorella sp. ARM0029B 10.3389/fpls.2018.00590
Role of rice cytosolic hexokinase OsHXK7 in sugar signaling and metabolism 10.1111/jipb.12366
Peptide transporter2 (PTR2) enhances water uptake during early seed germination in Arabidopsis thaliana 10.1007/s11103-020-00967-3
Spectral and photochemical diversity of tandem cysteine cyanobacterial phytochromes 10.1074/jbc.RA120.012950
Genetic Impairment of Cellulose Biosynthesis Increases Cell Wall Fragility and Improves Lipid Extractability from Oleaginous Alga Nannochloropsis salina 10.3390/microorganisms8081195
Expression of wheat Peptide TRansporter 2.1 (TaPTR2.1) during early seed germination 10.1007/s11816-020-00639-0
A More Accessible, Time-Saving, and Efficient Method for In Vitro Plant Regeneration from Potato Protoplasts 10.3390/plants10040781
Changsoo Kim
Kim Changsoo
ORCID: 0000-0002-3596-2934
The repetitive component of the A genome of peanut (Arachis hypogaea) and its role in remodelling intergenic sequence space since its evolutionary divergence from the B genome 10.1093/aob/mct128
CSGRqtl, a comparative quantitative trait locus database for saccharinae grasses 10.1104/pp.112.206870
Genetic analysis of recombinant inbred lines for Sorghum bicolor × Sorghum propinquum 10.1534/g3.112.003996
A genome-wide BAC end-sequence survey of sugarcane elucidates genome composition, and identifies BACs covering much of the euchromatin 10.1007/s11103-012-9987-x
SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum 10.1007/s00122-012-1790-1
Comparative analysis of peanut NBS-LRR gene clusters suggests evolutionary innovation among duplicated domains and erosion of gene microsynteny 10.1111/j.1469-8137.2011.03800.x
Inference of subgenomic origin of BACs in an interspecific hybrid sugarcane cultivar by overlapping oligonucleotide hybridizations 10.1139/g11-038
A draft physical map of a D-genome cotton species (Gossypium raimondii) 10.1186/1471-2164-11-395
Functional dissection of drought-responsive gene expression patterns in Cynodon dactylon L. 10.1007/s11103-009-9453-6
Duplication and divergence of grass genomes: Integrating the chloridoids 10.1007/s12042-009-9028-3
Transcriptome analysis of leaf tissue from Bermudagrass (Cynodon dactylon) using a normalised cDNA library 10.1071/FP08133
Application of genotyping by sequencing technology to a variety of crop breeding programs 10.1016/j.plantsci.2015.04.016
Cross-taxon application of sugarcane EST-SSR to genetic diversity analysis of bermudagrass (Cynodon spp.) 10.1007/s10722-017-0496-2
SSR-enriched genetic linkage maps of bermudagrass (Cynodon dactylon × transvaalensis), and their comparison with allied plant genomes 10.1007/s00122-017-2854-z
New source of bacterial soft rot resistance in wild potato (Solanum chacoense) tubers 10.1007/s10722-017-0487-3
Perspectives on the genomics research of important crops in the tribe Andropogoneae: Focusing on the Saccharum complex 10.7744/kjoas.20160001
Genetic analysis of rhizomatousness and its relationship with vegetative branching of recombinant inbred lines of Sorghum bicolor x S. propinquum 10.3732/ajb.1500035
Comparative Genetics of Seed Size Traits in Divergent Cereal Lineages Represented by Sorghum (Panicoidae) and Rice (Oryzoidae) 10.1534/g3.115.017590
Genetic analysis of vegetative branching in sorghum 10.1007/s00122-014-2384-x
Comparative Analysis of Miscanthus and Saccharum Reveals a Shared Whole-Genome Duplication but Different Evolutionary Fates 10.1105/tpc.114.125583
Comparative and Evolutionary Analysis of Major Peanut Allergen Gene Families 10.1093/gbe/evu189
Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships 10.1186/1471-2229-14-134
SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data 10.1186/1471-2164-15-162
CSGRqtl: A Comparative Quantitative Trait Locus Database for Saccharinae Grasses 10.1007/978-1-4939-6658-5_15
Genetic analysis of recombinant inbred lines for Sorghum bicolor × Sorghum propinquum 10.1534/g3.112.004499
Case study: Estimation of sorghum biomass using digital image analysis with Canopeo 10.1016/j.biombioe.2017.06.027
Comparative genomics of grasses: A saccharinae-centric view 10.1007/978-1-4419-5947-8_18
Building the sugarcane genome for biotechnology and identifying evolutionary trends 10.1186/1471-2164-15-540
Genome and evolution of the shade-requiring medicinal herb Panax ginseng 10.1111/pbi.12926
Transcriptome analysis and metabolic profiling of green and red kale (Brassica oleracea var. acephala) seedlings 10.1016/j.foodchem.2017.08.067
Characterization of twenty Camelina spp. accessions using single nucleotide polymorphism genotyping 10.1007/s13580-017-0264-4
Breeding of Lignocellulosic Bioethanol Feedstock 10.1007/s12892-017-0175-0
Assessment of genetic diversity and relationships based on RAPD and AFLP analyses in Miscanthus genera landraces 10.4141/CJPS2012-166
Genotyping-by-sequencing: a promising tool for plant genetics research and breeding 10.1007/s13580-017-0297-8
Genotyping by sequencing of 393 sorghum bicolor BTx623 × IS3620C recombinant inbred lines improves sensitivity and resolution of QTL detection 10.1534/g3.118.200173
Accumulation of Charantin and Expression of Triterpenoid Biosynthesis Genes in Bitter Melon (Momordica charantia) 10.1021/acs.jafc.7b01948
Genetic analysis of Gossypium fiber quality traits in reciprocal advanced backcross populations 10.3835/plantgenome2017.06.0057
Proton exchange membranes for fuel cell operation at low relative humidity and intermediate temperature: An updated review 10.1016/j.coelec.2017.10.020
High-resolution melting analysis for identification of apple cultivars using simple sequence repeat markers 10.1007/s11816-019-00539-y
Cytogenetic Diversity of Korean Hexaploid Wheat (Triticum aestivum L.) with Simple Sequence Repeats (SSRs) by Fluorescence In Situ Hybridization 1975-9479
Genomics Approach to Identify the Cause of the Missing Omega-5 Gliadin Protein in O-Free Wheat 2287-9366
Effects of LED lights on Expression of Genes Involved in Phenylpropanoid Biosynthesis and Accumulation of Phenylpropanoids in Wheat Sprout 10.3390/agronomy9060307
Constructing a Reference Genome in a Single Lab: The Possibility to Use Oxford Nanopore Technology 10.3390/plants8080270
Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop 2047-217X
History of Nucleotide Sequencing Technologies: Advances in Exploring Nucleotide Sequences from Mendel to the 21st Century 10.7235/HORT.20190055
Development of a Molecular Marker Using GWAS to Select the Resistance Resource for the Yeoncheon Strain Causing Kimchi Cabbage Clubroot Disease 10.7235/HORT.20190009
Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop 10.1093/gigascience/giz129
Reduced mass transport resistance in polymer electrolyte membrane fuel cell by polyethylene glycol addition to catalyst ink 10.1016/j.ijhydene.2018.08.134
Characterisation of the diffusion properties of metal foam hybrid flow-fields for fuel cells using optical flow visualisation and X-ray computed tomography 10.1016/j.jpowsour.2018.05.070
Cytogenetic Diversity of Korean Hexaploid Wheat (Triticum aestivum L.) with Simple Sequence Repeats (SSRs) by Fluorescence In Situ Hybridization 10.1007/s12892-018-0245-0
Effect of flour color and starch pasting properties on color of noodle dough sheet and texture of cooked noodles in Korean wheat cultivars 10.17957/IJAB/15.0891
Genomics approach to identify the cause of the Missing Omega-5 Gliadin protein in O-free wheat 10.9787/PBB.2018.6.4.413
Potential SNPs related to microspore culture in Raphanus sativus based on a single-marker analysis 10.1139/cjps-2017-0333
A genetic linkage map of wild Chrysanthemum species indigenous to Korea and its challenges 10.17957/IJAB/15.0818
Quantitative Trait Loci (QTLs) Associated with Microspore Culture in Raphanus sativus L. (Radish) 10.3390/genes11030337
Evolutionary impact of whole genome duplication in Poaceae family 10.1007/s12892-020-00049-2
Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum 10.3390/plants9101390
Application of Genomic Big Data in Plant Breeding: Past, Present, and Future 10.3390/plants9111454
Summary of the Sussex-Huawei locomotion-transportation recognition challenge
Observation of a manifold in the chaotic phase space of an asymmetric optical microcavity
Localized temporal variation of Earth's inner-core boundary from high-quality waveform doublets
Off-axis multi-wavelength dispersion controlling metalens for multi-color imaging
Impact of United States political sanctions on international collaborations and research in Iran