Paperbase

thomas wolfe

wolfe thomas / Thomas Mahteson Wolfe

ORCID: 0000-0002-1509-0147

https://twolfe.github.io/

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

Polygenic routes lead to parallel altitudinal adaptation in Heliosperma pusillum (Caryophyllaceae) 10.1101/2021.07.05.451094

Testing the potential contribution of Wolbachia to speciation when cytoplasmic incompatibility becomes associated with host‐related reproductive isolation 10.1111/mec.16157

Recurrent allopolyploidization events diversify eco-physiological traits in marsh orchids 10.1101/2021.08.28.458039

Lisa Klasson

Klasson Lisa

ORCID: 0000-0002-5874-7153

The unpredictable road to reduction. 10.1038/s41559-017-0263-y

Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks. 10.1093/gbe/evv108

Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae. 10.1186/1471-2164-15-1097

More than fishing in the dark: PCR of a dispersed sequence produces simple but ultrasensitive Wolbachia detection. 10.1186/1471-2180-14-121

Testing the reproducibility of multiple displacement amplification on genomes of clonal endosymbiont populations. 10.1371/journal.pone.0082319

The Norway spruce genome sequence and conifer genome evolution. 10.1038/nature12211

Comparative genomics of Wolbachia and the bacterial species concept. 10.1371/journal.pgen.1003381

The diversity and evolution of Wolbachia ankyrin repeat domain genes. 10.1371/journal.pone.0055390

Research on small genomes: implications for synthetic biology. 10.1002/bies.200900165

The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans. 10.1073/pnas.0810753106

Horizontal gene transfer between Wolbachia and the mosquito Aedes aegypti. 10.1186/1471-2164-10-33

Genome evolution of Wolbachia strain wPip from the Culex pipiens group. 10.1093/molbev/msn133

Ankyrin repeat domain-encoding genes in the wPip strain of Wolbachia from the Culex pipiens group. 10.1186/1741-7007-5-39

Strong asymmetric mutation bias in endosymbiont genomes coincide with loss of genes for replication restart pathways. 10.1093/molbev/msj107

Evolution of minimal-gene-sets in host-dependent bacteria. 10.1016/j.tim.2003.11.006

Microbial genome evolution: sources of variability. 10.1016/s1369-5274(02)00358-2

50 million years of genomic stasis in endosymbiotic bacteria. 10.1126/science.1071278

Comparative genomics of microbial pathogens and symbionts. 10.1093/bioinformatics/18.suppl_2.s17

Preliminary analysis and annotation of the partial genome sequence of Francisella tularensis strain Schu 4. 10.1046/j.1365-2672.2001.01499.x

Mutualists and parasites: how to paint yourself into a (metabolic) corner. 10.1016/s0014-5793(01)02459-0

The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont 10.1534/g3.117.300164

Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model 10.1186/s12864-019-5492-9

The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciation 10.1186/s12864-019-5816-9

Comparative genomics reveals factors associated with phenotypic expression of Wolbachia 10.1101/2021.01.29.428792

Persistence and invasiveness of high-level heteroplasmy through biparental transmission of a selfish mitochondrial genome in Drosophila 10.1101/2020.09.17.301572

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia 10.1093/gbe/evab111

Erika Corretto

Corretto Erika

ORCID: 0000-0002-7767-5191

Metagenomics of plant microbiomes 10.1007/978-3-319-61510-3_11

The draft genome sequence of Paenibacillus polymyxa strain CCI-25 encompasses high potential for secondary metabolite production 10.1128/genomeA.00366-16

Complete genome sequence of the heavy metal resistant bacterium Agromyces aureus AR33^T and comparison with related Actinobacteria 10.1186/s40793-016-0217-z

Root-associated bacteria promote grapevine growth: from the laboratory to the field 10.1007/s11104-016-3019-6

Multienzymatic preparation of 3-[(1R)-1-hydroxyethyl]benzoic acid and (2S)-hydroxy(phenyl)ethanoic acid 10.1016/j.tetasy.2010.07.007

Qualitative analysis of biosurfactants from Bacillus species exhibiting antifungal activity 10.1371/journal.pone.0198107

Draft genome sequences of 10 Microbacterium spp., with emphasis on heavy metalcontaminated environments 10.1128/genomeA.00432-15

Agromyces aureus sp. nov., isolated from the rhizosphere of Salix caprea L. grown in a heavy-metal-contaminated soil 10.1099/ijsem.0.001260

Combined amendment of immobilizers and the plant growth-promoting strain Burkholderia phytofirmans PsJN favours plant growth and reduces heavy metal uptake 10.1016/j.soilbio.2015.08.038

Correction: Qualitative analysis of biosurfactants from Bacillus species exhibiting antifungal activity(PLoS ONE (2018) 13:6 (e0198107) DOI: 10.1371/journal.pone.0198107) 10.1371/journal.pone.0201624

Comparative Genomics of Microbacterium Species to Reveal Diversity, Potential for Secondary Metabolites and Heavy Metal Resistance. 10.3389/fmicb.2020.01869

A Human Lung-Associated Streptomyces sp. TR1341 Produces Various Secondary Metabolites Responsible for Virulence, Cytotoxicity and Modulation of Immune Response. 10.3389/fmicb.2019.03028

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

The Genome Analysis of the Human Lung-Associated Streptomyces sp. TR1341 Revealed the Presence of Beneficial Genes for Opportunistic Colonization of Human Tissues 10.3390/microorganisms9081547

Daniel Bruzzese

Bruzzese Daniel / Daniel J. Bruzzese

ORCID: 0000-0002-3115-6599

Diversification in the microlepidopteran genus Mompha (Lepidoptera: Gelechioidea: Momphidae) is explained more by tissue specificity than host plant family 10.1101/466052

Phylogeny, host use, and diversification in the moth family Momphidae (Lepidoptera: Gelechioidea) 10.1371/journal.pone.0207833

Geographic and Ecological Dimensions of Host Plant-Associated Genetic Differentiation and Speciation in the Rhagoletis cingulata (Diptera: Tephritidae) Sibling Species Group 10.3390/insects10090275

Evidence for spatial clines and mixed geographic modes of speciation for North American cherry‐infesting Rhagoletis (Diptera: Tephritidae) flies 10.1002/ece3.6667

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

Testing the potential contribution of Wolbachia to speciation when cytoplasmic incompatibility becomes associated with host‐related reproductive isolation 10.1111/mec.16157

Recursive adaptation in action: allochronic isolation and divergence of host‐associated populations of the apple maggot fly, Rhagoletis pomonella , following its recent introduction to the western USA 10.1111/eea.13098

Hannes Schuler

Schuler Hannes

ORCID: 0000-0001-8307-9831

http://hschuler.people.unibz.it/

Wolbachia in Parasitoids Attacking Native European and Introduced Eastern Cherry Fruit Flies in Europe. 10.1093/ee/nvw137

Wolbachia endosymbionts in haplodiploid and diploid scolytine beetles (Coleoptera: Curculionidae: Scolytinae). 10.1111/1758-2229.12425

The hitchhiker's guide to Europe: the infection dynamics of an ongoing Wolbachia invasion and mitochondrial selective sweep in Rhagoletis cerasi. 10.1111/mec.13571

Evidence for a recent horizontal transmission and spatial spread of Wolbachia from endemic Rhagoletis cerasi (Diptera: Tephritidae) to invasive Rhagoletis cingulata in Europe. 10.1111/mec.12362

Divergent evolutionary histories of two sympatric spruce bark beetle species. 10.1111/mec.12296

Hit or miss in phylogeographic analyses: the case of the cryptic NUMTs. 10.1111/j.1755-0998.2011.03050.x

Allele intersection analysis: a novel tool for multi locus sequence assignment in multiply infected hosts. 10.1371/journal.pone.0022198

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 May 2009-31 July 2009. 10.1111/j.1755-0998.2009.02759.x

Diversity and distribution of Wolbachia in relation to geography, host plant affiliation and life cycle of a heterogonic gall wasp 10.1186/s12862-018-1151-z

Genomic Differentiation during Speciation-with-Gene-Flow: Comparing Geographic and Host-Related Variation in Divergent Life History Adaptation in Rhagoletis pomonella 10.3390/genes9050262

Reproductive Manipulators in the Bark Beetle Pityogenes chalcographus (Coleoptera: Curculionidae)—The Role of Cardinium, Rickettsia, Spiroplasma, and Wolbachia 10.1093/jisesa/iey044

Spatial spread of Wolbachia in Rhagoletis cerasi populations 10.1098/rsbl.2018.0161

Pleistocene climate cycling and host plant association shaped the demographic history of the bark beetle Pityogenes chalcographus 10.1038/s41598-018-32617-6

Invasion genetics of American cherry fruit fly in Europe and signals of hybridization with the European cherry fruit fly 10.1111/eea.12041

Multiple Wolbachia infections in Rhagoletis pomonella 10.1111/j.1570-7458.2011.01115.x

Divergence and evolution of reproductive barriers among three allopatric populations of Rhagoletis cingulata across eastern North America and Mexico 10.1111/eea.12331

Modes and Mechanisms of Speciation 10.1002/3527600906.mcb.201600015

Limited genetic evidence for host plant-related differentiation in the Western cherry fruit fly, Rhagoletis indifferens 10.1111/eea.12712

Speciation, Process of☆ https://doi.org/10.1016/B978-0-12-809633-8.02366-9

Dynamics of an Ongoing Wolbachia Spread in the European Cherry Fruit Fly, Rhagoletis cerasi (Diptera: Tephritidae) 10.3390/insects10060172

Host plant‐related genomic differentiation in the European cherry fruit fly, Rhagoletis cerasi 10.1111/mec.15239

The genomics of trait combinations and their influence on adaptive divergence 10.1101/2020.06.19.161539

Wolbachia-Mitochondrial DNA Associations in Transitional Populations of Rhagoletis cerasi 10.3390/insects11100675

Population genetics of the brown marmorated stink bug Halyomorpha halys in the early phase of invasion in South Tyrol (Northern Italy) 10.1017/S0007485320000553

Identification of Plant DNA in Adults of the Phytoplasma Vector Cacopsylla picta Helps Understanding Its Feeding Behavior 10.3390/insects11120835

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

Recent invasion and eradication of two members of the Euwallacea fornicatus species complex (Coleoptera: Curculionidae: Scolytinae) from tropical greenhouses in Europe 10.21203/rs.3.rs-640781/v1

Recent invasion and eradication of two members of the Euwallacea fornicatus species complex (Coleoptera: Curculionidae: Scolytinae) from tropical greenhouses in Europe 10.21203/rs.3.rs-640781/v2

Testing the potential contribution of Wolbachia to speciation when cytoplasmic incompatibility becomes associated with host‐related reproductive isolation 10.1111/mec.16157

Christian Stauffer

Stauffer Christian

ORCID: 0000-0002-2985-8911

Spatial spread of Wolbachia in Rhagoletis cerasi populations 10.1098/rsbl.2018.0161

Fine-scale genetic structure in an eastern Alpine black grouse Tetrao tetrix metapopulation 10.1111/jav.01681

Correction to ‘Spatial spread of Wolbachia in Rhagoletis cerasi populations’ 10.1098/rsbl.2018.0683

Dynamics of an Ongoing Wolbachia Spread in the European Cherry Fruit Fly, Rhagoletis cerasi (Diptera: Tephritidae) 10.3390/insects10060172

Host plant‐related genomic differentiation in the European cherry fruit fly, Rhagoletis cerasi 10.1111/mec.15239

Wolbachia-Mitochondrial DNA Associations in Transitional Populations of Rhagoletis cerasi 10.3390/insects11100675

Wolbachia-induced cytoplasmic incompatibility as a means for insect pest population control 10.1073/pnas.0403853101

The hitchhiker's guide to Europe: the infection dynamics of an ongoing Wolbachia invasion and mitochondrial selective sweep in Rhagoletis cerasi 10.1111/mec.13571

How differential management strategies affect Ips typographus L. dispersal 10.1016/j.foreco.2015.10.037

Wolbachiaendosymbionts in haplodiploid and diploid scolytine beetles (Coleoptera: Curculionidae: Scolytinae) 10.1111/1758-2229.12425

Wolbachiain Parasitoids Attacking Native European and Introduced Eastern Cherry Fruit Flies in Europe 10.1093/ee/nvw137

Genetic Analyses Suggest Separate Introductions of the Pine Pathogen Lecanosticta acicola Into Europe 10.1094/phyto-10-15-0271-r

Diapause and overwintering of two spruce bark beetle species 10.1111/phen.12200

Turning one into five: Integrative taxonomy uncovers complex evolution of cryptic species in the harvester ant Messor “structor” 10.1016/j.ympev.2018.04.005

Reproductive Manipulators in the Bark Beetle Pityogenes chalcographus (Coleoptera: Curculionidae)—The Role of Cardinium, Rickettsia, Spiroplasma, and Wolbachia 10.1093/jisesa/iey044

Pleistocene climate cycling and host plant association shaped the demographic history of the bark beetle Pityogenes chalcographus 10.1038/s41598-018-32617-6

Sterile insect technique and Wolbachia symbiosis as potential tools for the control of the invasive species Drosophila suzukii 10.1007/s10340-017-0944-y

Species-specific fish larvae drift in anthropogenically constructed riparian zones on the Vienna impoundment of the River Danube, Austria: Species occurrence, frequencies, and seasonal patterns based on DNA barcoding 10.1002/rra.3303

Limited Genetic Structure of Gypsy Moth Populations Reflecting a Recent History in Europe 10.3390/insects9040143

Combining sterile and incompatible insect techniques for the population suppression of Drosophila suzukii 10.1007/s10340-020-01199-6

Special issue on invasive pests of forests and urban trees: pathways, early detection, and management 10.1007/s10340-018-01073-6

The Apennines as a cryptic Pleistocene refugium of the bark beetle Pityogenes chalcographus (Coleoptera: Curculionidae) 10.1093/biolinnean/blz012

Irradiation dose response under hypoxia for the application of the sterile insect technique in Drosophila suzukii 10.1371/journal.pone.0226582

Shallow Genetic Structure among the European Populations of the Six-Toothed Bark Beetle Ips sexdentatus (Coleoptera, Curculionidae, Scolytinae) 10.3390/f10020136

New Data on the Range Expansion of the Thaumetopoea pityocampa (Lepidoptera: Notodontidae) ‘ENA clade’ in Greece: The Role of Bacterial Endosymbionts 10.1093/jee/toz216

Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies 10.1111/mec.15923

Facultative and obligate diapause phenotypes in populations of the European spruce bark beetle Ips typographus 10.1007/s10340-021-01416-w