Towards a better metabolic engineering reference: the microbial chassis
Kaleb Z. Abram
Zulema Udaondo
Microbial biotechnology, 2018-12-27
Kaleb Abram
Abram Kaleb
/ Kaleb Z. Abram
ORCID: 0000-0002-3311-662X
Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
10.1016/j.foodcont.2021.108559
Towards a better metabolic engineering reference: the microbial chassis
10.1111/1751-7915.13363
What can we learn from over 100,000 Escherichia coli genomes?
10.1101/708131
Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
10.1038/s42003-020-01626-5
Insertion sequences associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteremia
10.1101/2021.07.22.453447
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
