Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
Estrella Duque
Abdelali Daddaoua
Baldo F. Cordero
Zulema Udaondo
Carlos Molina-Santiago
Amalia Roca
Jennifer Solano
Eduarda Molina-Alcaide
Ana Segura
Juan-Luis Ramos
Microbial biotechnology, 2018-4
Amalia Roca
Roca Amalia
ORCID: 0000-0003-2332-3112
Events in root colonization by pseudomonas putida
10.1007/978-94-017-9555-5_10
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1
10.1128/JB.01281-10
Redundancy of enzymes for formaldehyde detoxification in Pseudomonas putida
10.1128/JB.00076-09
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
10.1093/femsre/fuv006
Identification of reciprocal adhesion genes in pathogenic and non-pathogenic Pseudomonas
10.1111/j.1462-2920.2012.02732.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil
10.1111/j.1751-7915.2012.00358.x
The heat, drugs and knockout systems of Microbial Biotechnology
10.1111/j.1751-7915.2009.00144.x
Corrigendum: In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase
10.1111/j.1758-2229.2009.00062.x
Field trial on removal of petroleum-hydrocarbon pollutants using a microbial consortium for bioremediation and rhizoremediation
10.1111/1758-2229.12174
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains
10.3389/fmicb.2015.00871
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1
10.1111/1462-2920.12037
Physiological responses of Pseudomonas putida to formaldehyde during detoxification
10.1111/j.1751-7915.2007.00014.x
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics
10.1111/1751-7915.12295
In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase
10.1111/j.1758-2229.2009.00032.x
Indigenous Pseudomonas spp. Strains from the Olive (Olea europaea L.) rhizosphere as effective biocontrol agents against Verticillium dahliae: From the host roots to the bacterial genomes
10.3389/fmicb.2018.00277
Specific gene loci of clinical Pseudomonas putida isolates
10.1371/journal.pone.0147478
Laboratory research aimed at closing the gaps in microbial bioremediation
10.1016/j.tibtech.2011.06.007
Bacillales members from the olive rhizosphere are effective biological control agents against the defoliating pathotype of verticillium dahliae
10.3390/agriculture8070090
Understanding butanol tolerance and assimilation in Pseudomonas putidaBIRD-1: An integrated omics approach
10.1111/1751-7915.12328
Restoration of a Mediterranean forest after a fire: Bioremediation and rhizoremediation field-scale trial
10.1111/1751-7915.12138
Molecular Responses to Solvent Stress: Strategies for Living in Unpalatable Substrates
10.1007/978-4-431-53898-1_47
New Pseudomonas spp. strains from the olive rhizosphere as effective biocontrol agents against Verticillium dahliae
10.14601/Phytopathol_Mediterr-20879
Plant growth‐stimulating rhizobacteria capable of producing
L
‐amino acids
10.1111/1758-2229.12887
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries
10.1111/1462-2920.15138
Histamine: A Bacterial Signal Molecule
10.3390/ijms22126312
Abdelali Daddaoua
Daddaoua Abdelali
ORCID: 0000-0002-7348-6393
Bovine Glycomacropeptide Is Anti-Inflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/135.5.1164
Goat Milk Oligosaccharides Are Anti-Inflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/136.3.672
The bisphosphonate alendronate improves the damage associated with trinitrobenzenesulfonic acid-induced colitis in rats
10.1038/sj.bjp.0707227
Active Hexose Correlated Compound Acts as a Prebiotic and Is Antiinflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/137.5.1222
Bovine glycomacropeptide ameliorates experimental rat ileitis by mechanisms involving downregulation of interleukin 17
10.1038/bjp.2008.138
Regulation of Glucose Metabolism inPseudomonas
10.1074/jbc.m109.014555
Bovine glycomacropeptide induces cytokine production in human monocytes through the stimulation of the MAPK and the NF-κB signal transduction pathways
10.1111/j.1476-5381.2009.00195.x
Non-absorbable glucids (active hexose correlated compound, inulin and fructooligosaccharides) exert immunomodulatory effects and induce differentiation in several intestinal cell types that are independent of their prebiotic actions
10.1017/s0029665110000303
New insights into the immunological effects of food bioactive peptides in animal models of intestinal inflammation
10.1017/s0029665110001783
Domain Cross-talk during Effector Binding to the Multidrug Binding TTGR Regulator
10.1074/jbc.m110.113282
Compartmentalized Glucose Metabolism in Pseudomonas putida Is Controlled by the PtxS Repressor
10.1128/jb.00520-10
Involvement of the Global Crp Regulator in Cyclic AMP-Dependent Utilization of Aromatic Amino Acids by Pseudomonas putida
10.1128/jb.06353-11
In situX-ray data collection from highly sensitive crystals ofPseudomonas putidaPtxS in complex with DNA
10.1107/s1744309112028540
Genes for Carbon Metabolism and the ToxA Virulence Factor in Pseudomonas aeruginosa Are Regulated through Molecular Interactions of PtxR and PtxS
10.1371/journal.pone.0039390
Transcriptional control by two interacting regulatory proteins: identification of the PtxS binding site at PtxR
10.1093/nar/gkt773
The nutritional supplement Active Hexose Correlated Compound (AHCC) has direct immunomodulatory actions on intestinal epithelial cells and macrophages involving TLR/MyD88 and NF-κB/MAPK activation
10.1016/j.foodchem.2012.09.039
Antibiotic adjuvants: identification and clinical use
10.1111/1751-7915.12044
Interspecies signalling:Pseudomonas putidaefflux pump TtgGHI is activated by indole to increase antibiotic resistance
10.1111/1462-2920.12368
Identification of New Residues Involved in Intramolecular Signal Transmission in a Prokaryotic Transcriptional Repressor
10.1128/jb.00589-13
Fructooligosacharides Reduce Pseudomonas aeruginosa PAO1 Pathogenicity through Distinct Mechanisms
10.1371/journal.pone.0085772
GtrS and GltR form a two-component system: the central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes inPseudomonas aeruginosa
10.1093/nar/gku496
Differential transcriptional response to antibiotics byPseudomonas putida DOT-T1E
10.1111/1462-2920.12775
The small intestinal mucosa acts as a rutin reservoir to extend flavonoid anti-inflammatory activity in experimental ileitis and colitis
10.1016/j.jff.2014.12.041
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics
10.1111/1751-7915.12295
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains
10.3389/fmicb.2015.00871
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid
10.1111/1751-7915.12333
Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator
10.1126/scisignal.aaa8271
So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals
10.1080/19420889.2016.1156832
Pseudomonas putida as a platform for the synthesis of aromatic compounds
10.1099/mic.0.000333
FleQ of Pseudomonas putida KT2440 is a multimeric cyclic diguanylate binding protein that differentially regulates expression of biofilm matrix components
10.1016/j.resmic.2016.07.005
A NodD-like protein activates transcription of genes involved with naringenin degradation in a flavonoid-dependent manner inHerbaspirillum seropedicae
10.1111/1462-2920.13604
Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures
10.1016/j.pep.2016.10.007
Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa
10.1111/1462-2920.13871
Identification and elucidation of in vivo
function of two alanine racemases from Pseudomonas putida
KT2440
10.1111/1758-2229.12576
High-Throughput Screening to Identify Chemoreceptor Ligands
10.1007/978-1-4939-7577-8_23
Regulation of carbohydrate degradation pathways in Pseudomonas
involves a versatile set of transcriptional regulators
10.1111/1751-7915.13263
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
An auxin controls bacterial antibiotics production
10.1093/nar/gky766
FCGR2A/FCGR3A Gene Polymorphisms and Clinical Variables as Predictors of Response to Tocilizumab and Rituximab in Patients With Rheumatoid Arthritis
10.1002/jcph.1341
Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato
10.1128/mbio.01868-19
Determination of Ligand Profiles for Pseudomonas aeruginosa Solute Binding Proteins
10.3390/ijms20205156
Ana Segura
Segura Ana
ORCID: 0000-0001-7985-5658
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas
10.1111/j.1758-2229.2011.00255.x
Isolation of new toluene-tolerant marine strains of bacteria and characterization of their solvent-tolerance properties
10.1111/j.1365-2672.2007.03666.x
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas
10.1111/j.1462-2920.2011.02493.x
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440
10.1111/j.1758-2229.2009.00084.x
Responses of Pseudomonas putida to toxic aromatic carbon sources
10.1016/j.jbiotec.2012.01.026
Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance
10.1007/s00792-003-0331-x
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1
10.1111/1462-2920.12037
Mechanisms of solvent tolerance in gram-negative bacteria
10.1146/annurev.micro.56.012302.161038
Fatty acid biosynthesis is involved in solvent tolerance in Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2004.00578.x
Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E
10.1128/JB.183.13.3967-3973.2001
Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying
10.1128/AEM.72.1.472-477.2006
Global regulation of food supply by Pseudomonas putida DOT-T1E
10.1128/JB.01129-09
Snakin-2, an antimicrobial peptide from potato whose gene is locally induced by wounding and responds to pathogen infection
10.1104/pp.010685
Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors
10.1111/j.1574-6976.2005.00008.x
Biotransformation in double-phase systems: Physiological responses of Pseudomonas putida DOT-T1E to a double phase made of aliphatic alcohols and biosynthesis of substituted catechols
10.1128/AEM.70.6.3637-3643.2004
The defensive role of nonspecific lipid-transfer proteins in plants
10.1016/S0966-842X(00)88879-4
Gef gene therapy enhances the therapeutic efficacy of doxorubicin to combat growth of MCF-7 breast cancer cells
10.1007/s00280-009-1135-1
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome
10.1111/1751-7915.12061
Removal of organic toxic chemicals in the rhizosphere and phyllosphere of plants
10.1111/j.1751-7915.2009.00090_13.x
Lipid transfer proteins (nsLTPs) from barley and maize leaves are potent inhibitors of bacterial and fungal plant pathogens
10.1016/0014-5793(93)81198-9
Responses of gram-negative bacteria to certain environmental stressors
10.1016/S1369-5274(00)00183-1
Novel defensin subfamily from spinach (Spinacia oleracea)
10.1016/S0014-5793(98)01060-6
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida
10.1046/j.1365-2958.2001.02310.x
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks
10.1128/JB.183.14.4127-4133.2001
The ttgGHI solvent efflux pump operon of Pseudomonas putida DOT-T1E is located on a large self-transmissible plasmid
10.1111/j.1462-2920.2007.01276.x
Proteomic analysis reveals the participation of energy- and stress-related proteins in the response of Pseudomonas putida DOT-T1E to toluene
10.1128/JB.187.17.5937-5945.2005
First- and second-generation biochemicals from sugars: Biosynthesis of itaconic acid
10.1111/1751-7915.12333
Life of microbes that interact with plants
10.1111/j.1751-7915.2009.00129.x
Cyclopropane fatty acids are involved in organic solvent tolerance but not in acid stress resistance in Pseudomonas putida DOT-T1E
10.1111/j.1751-7915.2009.00084.x
Regression of established subcutaneous B16-F10 murine melanoma tumors after gef gene therapy associated with the mitochondrial apoptotic pathway
10.1111/j.1600-0625.2009.00914.x
Substrate range and genetic analysis of Acinetobacter vanillate demethylase
10.1128/JB.182.5.1383-1389.2000
The cis-trans isomerase of unsaturated fatty acids in Pseudomonas and Vibrio: Biochemistry, molecular biology and physiological function of a unique stress adaptive mechanism
10.1016/S0378-1097(03)00792-4
The cytotoxic activity of the phage E protein suppress the growth of murine B16 melanomas in vitro and in vivo
10.1007/s00109-009-0493-9
Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions
10.1007/s00253-009-1928-5
Pseudothionin‐St1, a potato peptide active against potato pathogens
10.1111/j.1432-1033.1994.tb18974.x
Addressing the role of the extrusion pump-bearing pGRT1 plasmid in toluene biodegradation by Pseudomonas putida DOT-T1E under real case scenarios
10.2166/wst.2009.681
Plant-bacteria interactions in the removal of pollutants
10.1016/j.copbio.2012.09.011
Antibiotic-dependent induction of Pseudomonas putida DOT-T1E TtgABC efflux pump is mediated by the drug binding repressor TtgR
10.1128/AAC.47.10.3067-3072.2003
In vivo and in vitro evidence that TtgV is the specific regulator of the TtgGHI multidrug and solvent efflux pump of Pseudomonas putida
10.1128/JB.185.16.4755-4763.2003
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1
10.1128/JB.01281-10
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
10.1093/femsre/fuv006
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Spontaneous mutations affecting transcriptional regulation by protocatechuate in Acinetobacter
10.1016/S0378-1097(01)00247-6
Toluene tolerance systems in pseudomonas
10.1007/978-4-431-54520-0_11
Analysis of the core genome and pangenome of Pseudomonas putida
10.1111/1462-2920.13015
Exploiting environmental niches and the potential of environmental microbes
10.1111/j.1758-2229.2009.00072.x
Functional analysis of new transporters involved in stress tolerance in Pseudomonas putida DOT-T1E
10.1111/j.1758-2229.2009.00093.x
Purification and antipathogenic activity of lipid transfer proteins (LTPs) from the leaves of Arabidopsis and spinach
10.1016/0014-5793(93)80641-7
Compensatory role of the cis-trans-isomerase and cardiolipin synthase in the membrane fluidity of Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2007.01283.x
A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality
10.1111/j.1462-2920.2006.01236.x
Transcriptional Phase Variation at the flhB Gene of Pseudomonas putida DOT-T1E Is Involved in Response to Environmental Changes and Suggests the Participation of the Flagellar Export System in Solvent Tolerance
10.1128/JB.186.6.1905-1909.2004
Responses of Pseudomonas to small toxic molecules by a mosaic of domains
10.1016/j.mib.2009.02.001
Plasmid-mediated tolerance toward environmental pollutants
10.1128/microbiolspec. PLAS-0013-2013
Regulation of the cyclopropane synthase cfaB gene in Pseudomonas putida KT2440
10.1111/j.1574-6968.2011.02317.x
Bacterial responses and interactions with plants during rhizoremediation
10.1111/j.1751-7915.2009.00113.x
Laboratory research aimed at closing the gaps in microbial bioremediation
10.1016/j.tibtech.2011.06.007
Repression of Acinetobacter vanillate demethylase synthesis by VanR, a member of the GntR family of transcriptional regulators
10.1016/S0378-1097(00)00176-2
Solvent tolerance in Gram-negative bacteria
10.1016/j.copbio.2011.11.015
Combining electrokinetic transport and bioremediation for enhanced removal of crude oil from contaminated marine sediments: Results of a long-term, mesocosm-scale experiment
10.1016/j.watres.2019.03.094
Draft genome sequence of Pseudomonas putida JLR11, a facultative anaerobic 2,4,6-trinitrotoluene biotransforming bacterium
10.1128/genomeA.00904-15
Pseudomonas putida as a platform for the synthesis of aromatic compounds
10.1099/mic.0.000333
Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs
10.1016/j.scitotenv.2017.02.180
Root exudates from citrus plants subjected to abiotic stress conditions have a positive effect on rhizobacteria
10.1016/j.jplph.2018.06.003
Iron uptake analysis in a set of clinical isolates of pseudomonas putida
10.3389/fmicb.2016.02100
Benefits and perspectives on the use of biofuels
10.1111/1751-7915.12356
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
Microbial alkane production for jet fuel industry: motivation, state of the art and perspectives
10.1111/1751-7915.12423
A biotechnologist's dream: ‘doubly green’ processes
10.1111/1751-7915.12762
The quest for lower alcoholic wines
10.1111/1751-7915.12594
New family of biosensors for monitoring BTX in aquatic and edaphic environments
10.1111/1751-7915.12394
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators
10.1111/1751-7915.13263
Complete genome sequence of a Pseudomonas putida clinical isolate, strain H8234
10.1128/genomeA.00496-13
Degradation of phenanthrene by Novosphingobium sp. HS2a improved plant growth in PAHs-contaminated environments
10.1007/s00253-016-7892-y
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
Carlos Molina-Santiago
Molina-Santiago Carlos
/ Molina-Santiago, C
ORCID: 0000-0002-1131-8917
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
GtrS and GltR form a two-component system: the central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa.
10.1093/nar/gku496
Bactericidal and bacteriostatic antibiotics and the Fenton reaction.
10.1111/1751-7915.12120
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance.
10.1111/1462-2920.12368
Fructooligosacharides reduce Pseudomonas aeruginosa PAO1 pathogenicity through distinct mechanisms.
10.1371/journal.pone.0085772
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor.
10.1128/JB.00589-13
Antibiotic adjuvants: identification and clinical use.
10.1111/1751-7915.12044
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.
10.1128/AAC.05398-11
Directed evolution, natural products for cancer chemotherapy, and micro-biosensing robots.
10.1111/j.1751-7915.2011.00267.x
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
A Pseudomonas putida double mutant deficient in butanol assimilation: a promising step for engineering a biological biofuel production platform.
10.1093/femsle/fnw018
Understanding butanol tolerance and assimilation in Pseudomonas putida BIRD-1: an integrated omics approach.
10.1111/1751-7915.12328
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli
10.1111/1758-2229.12553
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J
10.1111/1758-2229.12245
Diversity of small RNAs expressed in Pseudomonas species
10.1111/1758-2229.12233
Insights in a novel gram‐positive type IV secretion system
10.1111/1462-2920.14296
The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization
10.1038/s41467-019-09944-x
Microbiomes as the new keystone for life sciences development
10.1111/1751-7915.13424
Chemical fertilization: a short‐term solution for plant productivity?
10.1111/1751-7915.13515
Dual functionality of the amyloid protein TasA in Bacillus physiology and fitness on the phylloplane
10.1038/s41467-020-15758-z
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages.
10.1016/j.foodchem.2019.125290
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
The race for antimicrobials in the multidrug resistance era.
10.1111/1751-7915.12884
More than words: the chemistry behind the interactions in the plant holobiont
10.1111/1462-2920.15197
Estrella Duque
Duque Estrella
ORCID: 0000-0002-4857-8974
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Genetic and functional characterization of a novel meta-pathway for degradation of naringenin in Herbaspirillum seropedicae SmR1.
10.1111/1462-2920.13313
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Understanding butanol tolerance and assimilation in Pseudomonas putida BIRD-1: an integrated omics approach.
10.1111/1751-7915.12328
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains.
10.3389/fmicb.2015.00871
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Contribution of arbuscular mycorrhizal fungi and/or bacteria to enhancing plant drought tolerance under natural soil conditions: effectiveness of autochthonous or allochthonous strains.
10.1016/j.jplph.2014.08.019
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Restoration of a Mediterranean forest after a fire: bioremediation and rhizoremediation field-scale trial.
10.1111/1751-7915.12138
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance.
10.1111/1462-2920.12368
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor.
10.1128/jb.00589-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
In vivo gene expression of Pseudomonas putida KT2440 in the rhizosphere of different plants.
10.1111/1751-7915.12037
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
The Pseudomonas putida HskA hybrid sensor kinase controls the composition of the electron transport chain.
10.1111/1758-2229.12017
Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil.
10.1111/j.1751-7915.2012.00358.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid.
10.1128/aem.00619-12
Identification of reciprocal adhesion genes in pathogenic and non-pathogenic Pseudomonas.
10.1111/j.1462-2920.2012.02732.x
Responses of Pseudomonas putida to toxic aromatic carbon sources.
10.1016/j.jbiotec.2012.01.026
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.
10.1128/aac.05398-11
Laboratory research aimed at closing the gaps in microbial bioremediation.
10.1016/j.tibtech.2011.06.007
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas.
10.1111/j.1462-2920.2011.02493.x
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment.
10.1111/j.1462-2920.2011.02492.x
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas.
10.1111/j.1758-2229.2011.00255.x
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1.
10.1128/jb.01281-10
Characterization of the RND family of multidrug efflux pumps: in silico to in vivo confirmation of four functionally distinct subgroups.
10.1111/j.1751-7915.2010.00189.x
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: differential chemotactic response towards receptor ligands.
10.1074/jbc.m110.110403
Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library.
10.1111/j.1462-2920.2010.02166.x
Global regulation of food supply by Pseudomonas putida DOT-T1E.
10.1128/jb.01129-09
Identification and characterization of the PhhR regulon in Pseudomonas putida.
10.1111/j.1462-2920.2009.02124.x
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440.
10.1111/j.1758-2229.2009.00084.x
Exploiting environmental niches and the potential of environmental microbes.
10.1111/j.1758-2229.2009.00072.x
A general profile for the MerR family of transcriptional regulators constructed using the semi-automated Provalidator tool.
10.1111/j.1758-2229.2009.00067.x
Responses of Pseudomonas to small toxic molecules by a mosaic of domains.
10.1016/j.mib.2009.02.001
Microbial responses to xenobiotic compounds. Identification of genes that allow Pseudomonas putida KT2440 to cope with 2,4,6-trinitrotoluene.
10.1111/j.1751-7915.2009.00085.x
Functional analysis of aromatic biosynthetic pathways in Pseudomonas putida KT2440.
10.1111/j.1751-7915.2008.00062.x
Physiological responses of Pseudomonas putida to formaldehyde during detoxification.
10.1111/j.1751-7915.2007.00014.x
A set of activators and repressors control peripheral glucose pathways in Pseudomonas putida to yield a common central intermediate.
10.1128/jb.01726-07
Rhizoremediation of lindane by root-colonizing Sphingomonas.
10.1111/j.1751-7915.2007.00004.x
Temperature and pyoverdine-mediated iron acquisition control surface motility of Pseudomonas putida.
10.1111/j.1462-2920.2007.01286.x
The RpoT regulon of Pseudomonas putida DOT-T1E and its role in stress endurance against solvents.
10.1128/jb.00950-06
Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying.
10.1128/aem.72.1.472-477.2006
Plasmolysis induced by toluene in a cyoB mutant of Pseudomonas putida.
10.1111/j.1462-2920.2004.00621.x
Biotransformation in double-phase systems: physiological responses of Pseudomonas putida DOT-T1E to a double phase made of aliphatic alcohols and biosynthesis of substituted catechols.
10.1128/aem.70.6.3637-3643.2004
Fatty acid biosynthesis is involved in solvent tolerance in Pseudomonas putida DOT-T1E.
10.1111/j.1462-2920.2004.00578.x
Transcriptional phase variation at the flhB gene of Pseudomonas putida DOT-T1E is involved in response to environmental changes and suggests the participation of the flagellar export system in solvent tolerance.
10.1128/jb.186.6.1905-1909.2004
Mechanisms of solvent tolerance in gram-negative bacteria.
10.1146/annurev.micro.56.012302.161038
Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks.
10.1128/jb.183.14.4127-4133.2001
Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E.
10.1128/jb.183.13.3967-3973.2001
A WbpL mutant of Pseudomonas putida DOT-T1E strain, which lacks the O-antigenic side chain of lipopolysaccharides, is tolerant to organic solvent shocks.
10.1007/s007920100176
Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida.
10.1046/j.1365-2958.2001.02310.x
Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions.
10.1016/s0038-0717(99)00156-x
Multiple responses of gram-negative bacteria to organic solvents.
10.1046/j.1462-2920.1999.00033.x
Mechanisms for solvent tolerance in bacteria.
10.1074/jbc.272.7.3887
Metabolism of nitrate esters by a consortium of two bacteria.
10.1038/nbt0396-320
Isolation and expansion of the catabolic potential of a Pseudomonas putida strain able to grow in the presence of high concentrations of aromatic hydrocarbons.
10.1128/jb.177.14.3911-3916.1995
Construction of a Pseudomonas hybrid strain that mineralizes 2,4,6-trinitrotoluene.
10.1128/jb.175.8.2278-2283.1993
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
