Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators
Udaondo, Z.
Ramos, J.-L.
Segura, A.
Krell, T.
Daddaoua, A.
Microbial biotechnology, 2018-4-2
Tino Krell
Krell Tino
ORCID: 0000-0002-9040-3166
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Abdelali Daddaoua
Daddaoua Abdelali
ORCID: 0000-0002-7348-6393
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Identification and elucidation of in vivo
function of two alanine racemases from Pseudomonas putida
KT2440
10.1111/1758-2229.12576
High-Throughput Screening to Identify Chemoreceptor Ligands
10.1007/978-1-4939-7577-8_23
Regulation of carbohydrate degradation pathways in Pseudomonas
involves a versatile set of transcriptional regulators
10.1111/1751-7915.13263
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
An auxin controls bacterial antibiotics production
10.1093/nar/gky766
FCGR2A/FCGR3A Gene Polymorphisms and Clinical Variables as Predictors of Response to Tocilizumab and Rituximab in Patients With Rheumatoid Arthritis
10.1002/jcph.1341
Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato
10.1128/mbio.01868-19
Determination of Ligand Profiles for Pseudomonas aeruginosa Solute Binding Proteins
10.3390/ijms20205156
Ana Segura
Segura Ana
ORCID: 0000-0001-7985-5658
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas
10.1111/j.1758-2229.2011.00255.x
Isolation of new toluene-tolerant marine strains of bacteria and characterization of their solvent-tolerance properties
10.1111/j.1365-2672.2007.03666.x
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas
10.1111/j.1462-2920.2011.02493.x
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440
10.1111/j.1758-2229.2009.00084.x
Responses of Pseudomonas putida to toxic aromatic carbon sources
10.1016/j.jbiotec.2012.01.026
Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance
10.1007/s00792-003-0331-x
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1
10.1111/1462-2920.12037
Mechanisms of solvent tolerance in gram-negative bacteria
10.1146/annurev.micro.56.012302.161038
Fatty acid biosynthesis is involved in solvent tolerance in Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2004.00578.x
Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E
10.1128/JB.183.13.3967-3973.2001
Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying
10.1128/AEM.72.1.472-477.2006
Global regulation of food supply by Pseudomonas putida DOT-T1E
10.1128/JB.01129-09
Snakin-2, an antimicrobial peptide from potato whose gene is locally induced by wounding and responds to pathogen infection
10.1104/pp.010685
Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors
10.1111/j.1574-6976.2005.00008.x
Biotransformation in double-phase systems: Physiological responses of Pseudomonas putida DOT-T1E to a double phase made of aliphatic alcohols and biosynthesis of substituted catechols
10.1128/AEM.70.6.3637-3643.2004
The defensive role of nonspecific lipid-transfer proteins in plants
10.1016/S0966-842X(00)88879-4
Gef gene therapy enhances the therapeutic efficacy of doxorubicin to combat growth of MCF-7 breast cancer cells
10.1007/s00280-009-1135-1
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome
10.1111/1751-7915.12061
Removal of organic toxic chemicals in the rhizosphere and phyllosphere of plants
10.1111/j.1751-7915.2009.00090_13.x
Lipid transfer proteins (nsLTPs) from barley and maize leaves are potent inhibitors of bacterial and fungal plant pathogens
10.1016/0014-5793(93)81198-9
Responses of gram-negative bacteria to certain environmental stressors
10.1016/S1369-5274(00)00183-1
Novel defensin subfamily from spinach (Spinacia oleracea)
10.1016/S0014-5793(98)01060-6
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida
10.1046/j.1365-2958.2001.02310.x
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks
10.1128/JB.183.14.4127-4133.2001
The ttgGHI solvent efflux pump operon of Pseudomonas putida DOT-T1E is located on a large self-transmissible plasmid
10.1111/j.1462-2920.2007.01276.x
Proteomic analysis reveals the participation of energy- and stress-related proteins in the response of Pseudomonas putida DOT-T1E to toluene
10.1128/JB.187.17.5937-5945.2005
First- and second-generation biochemicals from sugars: Biosynthesis of itaconic acid
10.1111/1751-7915.12333
Life of microbes that interact with plants
10.1111/j.1751-7915.2009.00129.x
Cyclopropane fatty acids are involved in organic solvent tolerance but not in acid stress resistance in Pseudomonas putida DOT-T1E
10.1111/j.1751-7915.2009.00084.x
Regression of established subcutaneous B16-F10 murine melanoma tumors after gef gene therapy associated with the mitochondrial apoptotic pathway
10.1111/j.1600-0625.2009.00914.x
Substrate range and genetic analysis of Acinetobacter vanillate demethylase
10.1128/JB.182.5.1383-1389.2000
The cis-trans isomerase of unsaturated fatty acids in Pseudomonas and Vibrio: Biochemistry, molecular biology and physiological function of a unique stress adaptive mechanism
10.1016/S0378-1097(03)00792-4
The cytotoxic activity of the phage E protein suppress the growth of murine B16 melanomas in vitro and in vivo
10.1007/s00109-009-0493-9
Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions
10.1007/s00253-009-1928-5
Pseudothionin‐St1, a potato peptide active against potato pathogens
10.1111/j.1432-1033.1994.tb18974.x
Addressing the role of the extrusion pump-bearing pGRT1 plasmid in toluene biodegradation by Pseudomonas putida DOT-T1E under real case scenarios
10.2166/wst.2009.681
Plant-bacteria interactions in the removal of pollutants
10.1016/j.copbio.2012.09.011
Antibiotic-dependent induction of Pseudomonas putida DOT-T1E TtgABC efflux pump is mediated by the drug binding repressor TtgR
10.1128/AAC.47.10.3067-3072.2003
In vivo and in vitro evidence that TtgV is the specific regulator of the TtgGHI multidrug and solvent efflux pump of Pseudomonas putida
10.1128/JB.185.16.4755-4763.2003
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1
10.1128/JB.01281-10
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
10.1093/femsre/fuv006
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Spontaneous mutations affecting transcriptional regulation by protocatechuate in Acinetobacter
10.1016/S0378-1097(01)00247-6
Toluene tolerance systems in pseudomonas
10.1007/978-4-431-54520-0_11
Analysis of the core genome and pangenome of Pseudomonas putida
10.1111/1462-2920.13015
Exploiting environmental niches and the potential of environmental microbes
10.1111/j.1758-2229.2009.00072.x
Functional analysis of new transporters involved in stress tolerance in Pseudomonas putida DOT-T1E
10.1111/j.1758-2229.2009.00093.x
Purification and antipathogenic activity of lipid transfer proteins (LTPs) from the leaves of Arabidopsis and spinach
10.1016/0014-5793(93)80641-7
Compensatory role of the cis-trans-isomerase and cardiolipin synthase in the membrane fluidity of Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2007.01283.x
A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality
10.1111/j.1462-2920.2006.01236.x
Transcriptional Phase Variation at the flhB Gene of Pseudomonas putida DOT-T1E Is Involved in Response to Environmental Changes and Suggests the Participation of the Flagellar Export System in Solvent Tolerance
10.1128/JB.186.6.1905-1909.2004
Responses of Pseudomonas to small toxic molecules by a mosaic of domains
10.1016/j.mib.2009.02.001
Plasmid-mediated tolerance toward environmental pollutants
10.1128/microbiolspec. PLAS-0013-2013
Regulation of the cyclopropane synthase cfaB gene in Pseudomonas putida KT2440
10.1111/j.1574-6968.2011.02317.x
Bacterial responses and interactions with plants during rhizoremediation
10.1111/j.1751-7915.2009.00113.x
Laboratory research aimed at closing the gaps in microbial bioremediation
10.1016/j.tibtech.2011.06.007
Repression of Acinetobacter vanillate demethylase synthesis by VanR, a member of the GntR family of transcriptional regulators
10.1016/S0378-1097(00)00176-2
Solvent tolerance in Gram-negative bacteria
10.1016/j.copbio.2011.11.015
Combining electrokinetic transport and bioremediation for enhanced removal of crude oil from contaminated marine sediments: Results of a long-term, mesocosm-scale experiment
10.1016/j.watres.2019.03.094
Draft genome sequence of Pseudomonas putida JLR11, a facultative anaerobic 2,4,6-trinitrotoluene biotransforming bacterium
10.1128/genomeA.00904-15
Pseudomonas putida as a platform for the synthesis of aromatic compounds
10.1099/mic.0.000333
Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs
10.1016/j.scitotenv.2017.02.180
Root exudates from citrus plants subjected to abiotic stress conditions have a positive effect on rhizobacteria
10.1016/j.jplph.2018.06.003
Iron uptake analysis in a set of clinical isolates of pseudomonas putida
10.3389/fmicb.2016.02100
Benefits and perspectives on the use of biofuels
10.1111/1751-7915.12356
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
10.1111/1751-7915.13269
Microbial alkane production for jet fuel industry: motivation, state of the art and perspectives
10.1111/1751-7915.12423
A biotechnologist's dream: ‘doubly green’ processes
10.1111/1751-7915.12762
The quest for lower alcoholic wines
10.1111/1751-7915.12594
New family of biosensors for monitoring BTX in aquatic and edaphic environments
10.1111/1751-7915.12394
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators
10.1111/1751-7915.13263
Complete genome sequence of a Pseudomonas putida clinical isolate, strain H8234
10.1128/genomeA.00496-13
Degradation of phenanthrene by Novosphingobium sp. HS2a improved plant growth in PAHs-contaminated environments
10.1007/s00253-016-7892-y
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
