Differential transcriptional response to antibiotics byPseudomonas putida DOT-T1E
Carlos Molina-Santiago
Abdelali Daddaoua
María Gómez Lozano
Zulema Udaondo
Søren Molin
Juan Luis Ramos
Environmental microbiology, 2015-1
Maria Gomez-Lozano
Gomez-Lozano Maria
ORCID: 0000-0002-7078-4141
Microaerophilic alkane degradation in Pseudomonas extremaustralis: a transcriptomic and physiological approach.
10.1007/s10295-017-1987-z
Oxidative stress under low oxygen conditions triggers hyperflagellation and motility in the Antarctic bacterium Pseudomonas extremaustralis.
10.1007/s00792-019-01110-x
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Novel Essential Role of Ethanol Oxidation Genes at Low Temperature Revealed by Transcriptome Analysis in the Antarctic Bacterium Pseudomonas extremaustralis.
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Diversity of small RNAs expressed in Pseudomonas species.
10.1111/1758-2229.12233
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
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Environmental heterogeneity drives within-host diversification and evolution of Pseudomonas aeruginosa.
10.1128/mbio.01592-14
Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa.
10.1186/1471-2164-15-783
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10.1007/978-1-4939-0473-0_34
Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa.
10.1111/j.1462-2920.2012.02759.x
Genome-wide identification of novel small RNAs in Pseudomonas aeruginosa
10.13140/RG.2.2.18809.29289
Occurrence and Distribution of Antibiotic Resistance in Artic Bacteria to Enviromental Antibiotic Exposure and Human Fecal Contamination
10.4122/1.1000000082
Abdelali Daddaoua
Daddaoua Abdelali
ORCID: 0000-0002-7348-6393
Bovine Glycomacropeptide Is Anti-Inflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/135.5.1164
Goat Milk Oligosaccharides Are Anti-Inflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/136.3.672
The bisphosphonate alendronate improves the damage associated with trinitrobenzenesulfonic acid-induced colitis in rats
10.1038/sj.bjp.0707227
Active Hexose Correlated Compound Acts as a Prebiotic and Is Antiinflammatory in Rats with Hapten-Induced Colitis
10.1093/jn/137.5.1222
Bovine glycomacropeptide ameliorates experimental rat ileitis by mechanisms involving downregulation of interleukin 17
10.1038/bjp.2008.138
Regulation of Glucose Metabolism inPseudomonas
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Bovine glycomacropeptide induces cytokine production in human monocytes through the stimulation of the MAPK and the NF-κB signal transduction pathways
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Non-absorbable glucids (active hexose correlated compound, inulin and fructooligosaccharides) exert immunomodulatory effects and induce differentiation in several intestinal cell types that are independent of their prebiotic actions
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New insights into the immunological effects of food bioactive peptides in animal models of intestinal inflammation
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Domain Cross-talk during Effector Binding to the Multidrug Binding TTGR Regulator
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Compartmentalized Glucose Metabolism in Pseudomonas putida Is Controlled by the PtxS Repressor
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Involvement of the Global Crp Regulator in Cyclic AMP-Dependent Utilization of Aromatic Amino Acids by Pseudomonas putida
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In situX-ray data collection from highly sensitive crystals ofPseudomonas putidaPtxS in complex with DNA
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Genes for Carbon Metabolism and the ToxA Virulence Factor in Pseudomonas aeruginosa Are Regulated through Molecular Interactions of PtxR and PtxS
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Transcriptional control by two interacting regulatory proteins: identification of the PtxS binding site at PtxR
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The nutritional supplement Active Hexose Correlated Compound (AHCC) has direct immunomodulatory actions on intestinal epithelial cells and macrophages involving TLR/MyD88 and NF-κB/MAPK activation
10.1016/j.foodchem.2012.09.039
Antibiotic adjuvants: identification and clinical use
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Interspecies signalling:Pseudomonas putidaefflux pump TtgGHI is activated by indole to increase antibiotic resistance
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Identification of New Residues Involved in Intramolecular Signal Transmission in a Prokaryotic Transcriptional Repressor
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Fructooligosacharides Reduce Pseudomonas aeruginosa PAO1 Pathogenicity through Distinct Mechanisms
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GtrS and GltR form a two-component system: the central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes inPseudomonas aeruginosa
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Differential transcriptional response to antibiotics byPseudomonas putida DOT-T1E
10.1111/1462-2920.12775
The small intestinal mucosa acts as a rutin reservoir to extend flavonoid anti-inflammatory activity in experimental ileitis and colitis
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Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics
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Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains
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First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid
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Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator
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So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals
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Pseudomonas putida as a platform for the synthesis of aromatic compounds
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FleQ of Pseudomonas putida KT2440 is a multimeric cyclic diguanylate binding protein that differentially regulates expression of biofilm matrix components
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A NodD-like protein activates transcription of genes involved with naringenin degradation in a flavonoid-dependent manner inHerbaspirillum seropedicae
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Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures
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Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa
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Identification and elucidation of in vivo
function of two alanine racemases from Pseudomonas putida
KT2440
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High-Throughput Screening to Identify Chemoreceptor Ligands
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Regulation of carbohydrate degradation pathways in Pseudomonas
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Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production
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An auxin controls bacterial antibiotics production
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FCGR2A/FCGR3A Gene Polymorphisms and Clinical Variables as Predictors of Response to Tocilizumab and Rituximab in Patients With Rheumatoid Arthritis
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Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato
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Determination of Ligand Profiles for Pseudomonas aeruginosa Solute Binding Proteins
10.3390/ijms20205156
Juan L. Ramos
Ramos Juan L.
ORCID: 0000-0002-8731-7435
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Identification of products resulting from the biological reduction of 2,4,6-trinitrotoluene, 2,4-dinitrotoluene, and 2,6-dinitrotoluene by Pseudomonas sp.
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PpoR, an orphan LuxR-family protein of Pseudomonas putida KT2440, modulates competitive fitness and surface motility independently of N-acylhomoserine lactones
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Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene
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Twenty one important things you should know
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GtrS and GltR form a two-component system: The central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa
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Role of iron and the TonB system in colonization of corn seeds and roots by Pseudomonas putida KT2440
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Tactic responses to pollutants and their potential to increase biodegradation efficiency
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Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E
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Sugar (ribose), spice (peroxidase) and all things nice (laccase hair-dyes)
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Photoproduction of ammonia from nitrate by Anacystis nidulans cells
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Construction of a prototype two-component system from the phosphorelay system TodS/TodT
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Diversity of small RNAs expressed in Pseudomonas species
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From the test tube to the environment-and back
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Differential transcriptional response to antibiotics by Pseudomonas putidaDOT-T1E
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Proteomic analysis reveals the participation of energy- and stress-related proteins in the response of Pseudomonas putida DOT-T1E to toluene
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Physiological Characterization of Pseudomonas putida DOT-T1E Tolerance to p-Hydroxybenzoate
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The RpoT regulon of Pseudomonas putida DOT-T1E and its role in stress endurance against solvents
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Functional analysis of new transporters involved in stress tolerance in Pseudomonas putida DOT-T1E
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Sequential XylS-CTD binding to the Pm promoter induces DNA bending prior to activation
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The Transcriptional Repressor TtgV Recognizes a Complex Operator as a Tetramer and Induces Convex DNA Bending
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Optimization of the Palindromic Order of the TtgR Operator Enhances Binding Cooperativity
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In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase
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Preface
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Regulation of nitrogenase levels in Anabaena sp. ATCC 33047 and other filamentous cyanobacteria
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Genetic engineering of a highly solvent-tolerant Pseudomonas putida strain for biotransformation of toluene to p-hydroxybenzoate
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Pseudomonas
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Purification and characterization of glutamine synthetase from the unicellular cynabacterium Anacystis nidulans
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Designing bacteria for the degradation of nitro- and chloroaromatic pollutants
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Responses of Pseudomonas putida to toxic aromatic carbon sources
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A general profile for the MerR family of transcriptional regulators constructed using the semi-automated Provalidator tool
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Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance
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Intramolecular signal transmission in a tetrameric repressor of the IclR family
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New molecular techniques for pathogen analysis, in silico determination of RND efflux pump substrate specificity, shotgun proteomic monitoring of bioremediation and yeast bio-applications
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In vivo gene expression of Pseudomonas putidaKT2440 in the rhizosphere of different plants
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A double mutant of Pseudomonas putida JLR11 deficient in the synthesis of the nitroreductase PnrA and assimilatory nitrite reductase NasB is impaired for growth on 2,4,6-trinitrotoluene (TNT)
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The sensor kinase TodS operates by a multiple step phosphorelay mechanism involving two autokinase domains
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Microbial goods from single cells and metagenomes
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The methionine biosynthetic pathway from homoserine in Pseudomonas putida involves the metW, metX, metZ, metH and metE gene products
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Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying
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Engineering Biological Approaches for Detection of Toxic Compounds: A New Microbial Biosensor Based on the Pseudomonas putida TtgR Repressor
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Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors
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Environmental biotechnology
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Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: In vitro expression technology capture and identification of root-activated promoters
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Biotransformation in double-phase systems: Physiological responses of Pseudomonas putida DOT-T1E to a double phase made of aliphatic alcohols and biosynthesis of substituted catechols
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Leucines 193 and 194 at the N-terminal domain of the XylS protein, the positive transcriptional regulator of the TOL meta-cleavage pathway, are involved in dimerization
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Environmental Microbiology meets Microbial Biotechnology
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Temperature and pyoverdine-mediated iron acquisition control surface motility of Pseudomonas putida
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Ventilation and heart rate monitoring in drivers using a contactless electrical bioimpedance system
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Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals
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Rhizoremediation of lindane by root-colonizing Sphingomonas
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XylS-Pm Promoter Interactions through Two Helix-Turn-Helix Motifs: Identifying XylS Residues Important for DNA Binding and Activation
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The nifH, nifM and nifN genes of Azotobacter vinelandii: Characterisation by Tn 5 mutagenesis and isolation from pLAFR1 gene banks
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Evidence for chemoreceptors with bimodular ligand-binding regions harboring two signal-binding sites
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Residues 137 and 153 of XylS influence contacts with the C-terminal domain of the RNA polymerase α subunit
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Exploring the rhizospheric and endophytic bacterial communities of Acer pseudoplatanus growing on a TNT-contaminated soil: towards the development of a rhizocompetent TNT-detoxifying plant growth promoting consortium
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A two-partner secretion system is involved in seed and root colonization and iron uptake by Pseudomonas putida KT2440
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Multiple signals modulate the activity of the complex sensor kinase TodS
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Microbial biotechnology: Biofuels, genotoxicity reporters and robust agro-ecosystems
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Transcriptional control by two interacting regulatory proteins: Identification of the PtxS binding site at PtxR
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Specific gene loci of clinical Pseudomonas putida isolates
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The TetR family of transcriptional repressors
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Novel BRAFI599Insmutation identified in a follicular variant of a papillary thyroid carcinoma: A molecular modeling approach
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OYE flavoprotein reductases initiate the condensation of TNT-derived intermediates to secondary diarylamines and nitrite
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Lessons from the genome of a lithoautotroph: Making biomass from almost nothing
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Gene expression in Pseudomonas
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XylS activator and RNA polymerase binding sites at the Pm promoter overlap
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The XyIS-dependent Pm promoter is transcribed in vivo by RNA polymerase with σ32 or σ38 depending on the growth phase
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Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: Differential chemotactic response towards receptor ligands
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Single amino acids changes in the signal receptor domain of XylR resulted in mutants that stimulate transcription in the absence of effectors
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Changes in myocardial electrical impedance in human heart graft rejection
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Physiological responses of Pseudomonas putida to formaldehyde during detoxification
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Pipelines for New Chemicals: A strategy to create new value chains and stimulate innovation-based economic revival in Southern European countries
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The ttgGHI solvent efflux pump operon of Pseudomonas putida DOT-T1E is located on a large self-transmissible plasmid
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XylS domain interactions can be deduced from intraallelic dominance in double mutants of Pseudomonas putida
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Restoration of a Mediterranean forest after a fire: Bioremediation and rhizoremediation field-scale trial
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A WbpL mutant of Pseudomonas putida DOT-T1E strain, which lacks the 0-antigenic side chain of lipopolysaccharides, is tolerant to organic solvent shocks
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Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators
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Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization
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Pseudomonas aeruginosa strain RW41 mineralizes 4-chlorobenzenesulfonate, the major polar by-product from DDT manufacturing
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Exploiting environmental niches and the potential of environmental microbes
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Mutations in each of the tol genes of Pseudomonas putida reveal that they are critical for maintenance of outer membrane stability
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A bioluminescent derivative of Pseudomonas putida KT2440 for deliberate release into the environment
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Respiration of 2,4,6-trinitrotoluene by Pseudomonas sp. strain JLR11
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Responses of Pseudomonas to small toxic molecules by a mosaic of domains
10.1016/j.mib.2009.02.001
The IclR family of transcriptional activators and repressors can be defined by a single profile
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Bactericidal and bacteriostatic antibiotics and the Fenton reaction
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Characterization of the Pseudomonas putida mobile genetic element ISPpu10: An occupant of repetitive extragenic palindromic sequences
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Type II hydride transferases from different microorganisms yield nitrite and diarylamines from polynitroaromatic compounds
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Microbial Biotechnology: Evolution of your premier journal
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Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression
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Cell density-dependent gene contributes to efficient seed colonization by Pseudomonas putida KT2440
10.1128/AEM.70.9.5190-5198.2004
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440
10.1111/j.1758-2229.2009.00084.x
Using Genomics to Unveil Bacterial Determinants of Rhizosphere Life Style
10.1002/9781118297674.ch2
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1
10.1111/1462-2920.12037
Involvement of the TonB system in tolerance to solvents and drugs in Pseudomonas putida DOT-T1E
10.1128/JB.183.18.5285-5292.2001
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins
10.1073/pnas.0602902103
Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: Genomic and flux analysis
10.1128/JB.00203-07
Evidence for in situ crude oil biodegradation after the Prestige oil spill
10.1111/j.1462-2920.2005.00742.x
Simultaneous catabolite repression between glucose and toluene metabolism in Pseudomonas putida is channeled through different signaling pathways
10.1128/JB.00679-07
Fatty acid biosynthesis is involved in solvent tolerance in Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2004.00578.x
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials
10.1016/j.jmb.2007.03.062
Cross-regulation between a novel two-component signal transduction system for catabolism of toluene in pseudomonas mendocina and the TodST system from pseudomonas putida
10.1128/JB.184.24.7062-7067.2002
Catabolism of Phenylalanine by Pseudomonas putida: The NtrC-family PhhR Regulator Binds to Two Sites Upstream from the phhA Gene and Stimulates Transcription with σ70
10.1016/j.jmb.2006.12.008
A two-component regulatory system integrates redox state and population density sensing in Pseudomonas putida
10.1128/JB.00868-08
Tolerance to sudden organic solvent shocks by soil bacteria and characterization of Pseudomonas putida strains isolated from toluene polluted sites
10.1021/es991171a
The davDT operon of Pseudomonas putida, involved in lysine catabolism, is induced in response to the pathway intermediate δ-aminovaleric acid
10.1128/JB.186.11.3439-3446.2004
Broad-host range expression vectors containing manipulated meta-cleavage pathway regulatory elements of the TOL plasmid
10.1016/0014-5793(88)81431-5
Removal of organic toxic chemicals in the rhizosphere and phyllosphere of plants
10.1111/j.1751-7915.2009.00090_13.x
Functional analysis of aromatic biosynthetic pathways in Pseudomonas putida KT2440
10.1111/j.1751-7915.2008.00062.x
Interactions of the XylS regulators with the C-terminal domain of the RNA polymerase α subunit influence the expression level from the cognate Pm promoter
10.1016/S0014-5793(01)02192-5
Taxonomic and Functional Metagenomic Profiling of the Microbial Community in the Anoxic Sediment of a Sub-saline Shallow Lake (Laguna de Carrizo, Central Spain)
10.1007/s00248-011-9903-y
Multiple and interconnected pathways for l-lysine catabolism in Pseudomonas putida KT2440
10.1128/JB.187.21.7500-7510.2005
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440
10.1128/AAC.05398-11
Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library
10.1111/j.1462-2920.2010.02166.x
Subfunctionality of hydride transferases of the old yellow enzyme family of flavoproteins of Pseudomonas putida
10.1128/AEM.00386-08
TtgV Bound to a Complex Operator Site Represses Transcription of the Promoter for the Multidrug and Solvent Extrusion TtgGHI Pump
10.1128/JB.186.10.2921-2927.2004
Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida
10.1111/j.1574-6976.2010.00249.x
Sensing of environmental signals: Classification of chemoreceptors according to the size of their ligand binding regions
10.1111/j.1462-2920.2010.02325.x
The Prc and RseP proteases control bacterial cell-surface signalling activity
10.1111/1462-2920.12371
Removal of nitrate from industrial wastewaters in a pilot plant by nitrate-tolerant Klebsiella oxytoca CECT 4460 and Arthrobacter globiformis CECT 4500
10.1002/(SICI)1097-0290(19980605)58:5<510::AID-BIT7>3.0.CO;2-G
Corrigendum: In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase
10.1111/j.1758-2229.2009.00062.x
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere
10.1186/gb-2007-8-9-r179
Adaptive drug resistance mediated by root-nodulation-cell division efflux pumps
10.1111/j.1469-0691.2008.02693.x
First- and second-generation biochemicals from sugars: Biosynthesis of itaconic acid
10.1111/1751-7915.12333
Photosynthetic production of ammonia
10.1007/BF01944528
Bioremediation of 2,4,6-trinitrotoluene under field conditions
10.1021/es062165z
Preface
10.1007/978-1-4939-473_0
Cloning, structure and expression of a pea cDNA clone coding for a photosynthetic fructose-1,6-bisphosphatase with some features different from those of the leaf chloroplast enzyme
10.1007/BF02411553
Plant-bacteria interactions in the removal of pollutants
10.1016/j.copbio.2012.09.011
Identification of reciprocal adhesion genes in pathogenic and non-pathogenic Pseudomonas
10.1111/j.1462-2920.2012.02732.x
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida
10.1093/femsre/fuv006
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants
10.1016/j.febslet.2012.07.031
Fate of Pseudomonas putida after release into lake water mesocosms: Different survival mechanisms in response to environmental conditions
10.1007/BF00165812
Field trial on removal of petroleum-hydrocarbon pollutants using a microbial consortium for bioremediation and rhizoremediation
10.1111/1758-2229.12174
Dual System to Reinforce Biological Containment of Recombinant Bacteria Designed for Rhizoremediation
10.1128/AEM.67.6.2649-2656.2001
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance
10.1111/1462-2920.12368
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
10.1111/j.1462-2920.2005.00890.x
Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid
10.1128/AEM.00619-12
Bacterial responses and interactions with plants during rhizoremediation
10.1111/j.1751-7915.2009.00113.x
In situ X-ray data collection from highly sensitive crystals of Pseudomonas putida PtxS in complex with DNA
10.1107/S1744309112028540
Critical nucleotides in the upstream region of the XylS-dependent TOL meta-cleavage pathway operon promoter as deduced from analysis of mutants
10.1074/jbc.274.4.2286
Transcriptional organization of the Pseudomonas putida tol-oprL genes
10.1128/JB.185.1.184-195.2003
Study of the TmoS/TmoT two-component system: Towards the functional characterization of the family of TodS/TodT like systems
10.1111/j.1751-7915.2011.00322.x
Biomonitoring of urinary metals in a population living in the vicinity of industrial sources: A comparison with the general population of Andalusia, Spain
10.1016/j.scitotenv.2008.08.041
Preface
10.1007/0-387-28881-3
Understanding butanol tolerance and assimilation in Pseudomonas putidaBIRD-1: An integrated omics approach
10.1111/1751-7915.12328
Solvent tolerance in Gram-negative bacteria
10.1016/j.copbio.2011.11.015
Mutational analysis of the highly conserved C-terminal residues of the XylS protein, a member of the AraC family of transcriptional regulators
10.1016/S0014-5793(00)01749-X
Redundancy of enzymes for formaldehyde detoxification in Pseudomonas putida
10.1128/JB.00076-09
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas
10.1111/j.1758-2229.2011.00255.x
RNA polymerase holoenzymes can share a single transcription start site for the Pm promoter: Critical nucleotides in the -7 to -18 region are needed to select between RNA polymerase with σ38 or σ32
10.1074/jbc.M505415200
Detection of multiple extracytoplasmic function (ECF) sigma factors in the genome of Pseudomonas putida KT2440 and their counterparts in Pseudomonas aeruginosa PA01
10.1046/j.1462-2920.2002.00371.x
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440
10.1111/1758-2229.12167
Inhibition of growth and induction of apoptosis in human breast cancer by transfection of gef gene
10.1038/sj.bjc.6601064
Pseudomonas putida mutants in the exbBexbDtonB gene cluster are hypersensitive to environmental and chemical stressors
10.1111/j.1462-2920.2004.00595.x
Cyclic diguanylate turnover mediated by the sole GGDEF/EAL response regulator in Pseudomonas putida: Its role in the rhizosphere and an analysis of its target processes
10.1111/j.1462-2920.2011.02499.x
16S rDNA phylogeny and distribution of lin genes in novel hexachlorocyclohexane-degrading Sphingomonas strains
10.1111/j.1462-5822.2005.00820.x
Characterization of molecular interactions using isothermal titration calorimetry
10.1007/978-1-4939-0473-0_16
Towards a genome-wide mutant library of pseudomonas putida strain KT2440
10.1007/978-1-4020-6097-7_8
Control of expression of divergent pseudomonas putida put promoters for proline catabolism
10.1128/AEM.66.12.5221-5225.2000
Mechanisms of solvent tolerance in gram-negative bacteria
10.1146/annurev.micro.56.012302.161038
Limits in energy generation and biotechnology of primary and secondary products
10.1111/j.1751-7915.2008.00052.x
Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators
10.1101/gad.603510
Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions
10.1016/S0038-0717(99)00156-X
Short and direct science: Environmental Microbiology Reports
10.1111/j.1758-2229.2009.00048.x
Biological degradation of 2,4,6-trinitrotoluene
10.1128/MMBR.65.3.335-352.2001
Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds
10.1128/JB.182.9.2363-2369.2000
Assessing bacterial diversity in the rhizosphere of Thymus zygis growing in the Sierra Nevada National Park (Spain) through culture-dependent and independent approaches
10.1371/journal.pone.0146558
Diversity at its best: Bacterial taxis
10.1111/j.1462-2920.2010.02383.x
Microbial responses to xenobiotic compounds. Identification of genes that allow Pseudomonas putida KT2440 to cope with 2,4,6-trinitrotoluene
10.1111/j.1751-7915.2009.00085.x
TtgV represses two different promoters by recognizing different sequences
10.1128/JB.01504-08
Complexity in efflux pump control: Cross-regulation by the paralogues TtgV and TtgT
10.1111/j.1365-2958.2007.06004.x
Integration of signals through Crc and PtsN in catabolite repression of Pseudomonas putida TOL plasmid pWW0
10.1128/AEM.71.8.4191-4198.2005
Global regulation of food supply by Pseudomonas putida DOT-T1E
10.1128/JB.01129-09
Urinary levels of arsenic and heavy metals in children and adolescents living in the industrialised area of Ria of Huelva (SW Spain)
10.1016/j.envint.2010.04.012
Plasmolysis induced by toluene in a cyoB mutant of Pseudomonas putida
10.1111/j.1462-2920.2004.00621.x
Levels and chemical composition of PM in a city near a large Cu-smelter in Spain
10.1039/c0em00708k
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains
10.3389/fmicb.2015.00871
Identification of the initial steps in D-lysine catabolism in Pseudomonas putida
10.1128/JB.01538-06
Different modes of binding of mono- and biaromatic effectors to the transcriptional regulator TTGV: Role in differential derepression from its cognate operator
10.1074/jbc.M610032200
Catabolite repression of the TodS/TodT two-component system and effector-dependent transphosphorylation of TodT as the basis for toluene dioxygenase catabolic pathway control
10.1128/JB.00379-10
Involvement of the global crp regulator in cyclic amp-dependent utilization of aromatic amino acids by pseudomonas putida
10.1128/JB.06353-11
Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor
10.1128/JB.00520-10
Comparison of omega wave system and polar S810i to detect R-R intervals at rest
10.1055/s-0030-1248319
Microbial Biotechnology from medicine to bacterial population dynamics
10.1111/j.1751-7915.2009.00110.x
PnrA, a new nitroreductase-family enzyme in the TNT-degrading strain Pseudomonas putida JLR11
10.1111/j.1462-2920.2005.00801.x
Residues 137 and 153 at the N terminus of the XylS protein influence the effector profile of this transcriptional regulator and the σ factor used by RNA polymerase to stimulate transcription from its cognate promoter
10.1074/jbc.M110226200
Degradation of o-methoxybenzoate by a two-member consortium made up of a gram-positive Arthrobacter strain and a gram-negative Pantotea strain
10.1023/A:1026541518663
BacTregulators: A database of transcriptional regulators in bacteria and archaea
10.1093/bioinformatics/bth330
Transoesophageal electronic bioimpedance device for the study of post-transplant heart rejection
10.1007/978-3-540-89208-3_281
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Molecular binding mechanism of TtgR repressor to antibiotics and antimicrobials
10.1371/journal.pone.0138469
A broad range of themes in Microbial Biotechnology
10.1111/j.1751-7915.2008.00076.x
Escherichia coli has multiple enzymes that attack TNT and release nitrogen for growth
10.1111/j.1462-2920.2007.01272.x
Signal-regulator interactions, genetic analysis of the effector binding site of xyls, the benzoate-activated positive regulator of Pseudomonas TOL plasmid meta-cleavage pathway operon
10.1016/0022-2836(90)90358-S
Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks
10.1128/JB.183.14.4127-4133.2001
The cytotoxic activity of the phage E protein suppress the growth of murine B16 melanomas in vitro and in vivo
10.1007/s00109-009-0493-9
Transition from reversible to irreversible attachment during biofilm formation by Pseudomonas fluorescens WCS365 requires an ABC transporter and a large secreted protein
10.1046/j.1365-2958.2003.03615.x
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate
10.1107/S1744309112004940
Antibiotic-dependent induction of Pseudomonas putida DOT-T1E TtgABC efflux pump is mediated by the drug binding repressor TtgR
10.1128/AAC.47.10.3067-3072.2003
Mechanisms for solvent tolerance in bacteria
10.1074/jbc.272.7.3887
Physical organization of the upper pathway operon promoter of the Pseudomonas TOL plasmid. Sequence and positional requirements for XylR-dependent activation of transcription
10.1007/BF00281629
Toluene tolerance systems in pseudomonas
10.1007/978-4-431-54520-0_11
Analysis of the core genome and pangenome of Pseudomonas putida
10.1111/1462-2920.13015
Pseudomonas putida KT2440 causes induced systemic resistance and changes in Arabidopsis root exudation
10.1111/j.1758-2229.2009.00091.x
Metabolic engineering, new antibiotics and biofilm viscoelasticity
10.1111/j.1751-7915.2009.00157.x
New molecular tools for enhancing methane production, explaining thermodynamically limited lifestyles and other important biotechnological issues
10.1111/j.1751-7915.2009.00134.x
Regulation of glucose metabolism in Pseudomonas. The phosphorylative branch and Entner-Doudoroff enzymes are regulated by a repressor containing a sugar isomerase domain
10.1074/jbc.M109.014555
Cold is cool, the human microbiota and taking multiple SIPs
10.1111/j.1751-7915.2011.00287.x
Analysis of the mRNA structure of the Pseudomonas putida TOL meta fission pathway operon around the transcription initiation point, the xylTE and the xylFJ regions
10.1016/0167-4781(93)90149-8
Compensatory role of the cis-trans-isomerase and cardiolipin synthase in the membrane fluidity of Pseudomonas putida DOT-T1E
10.1111/j.1462-2920.2007.01283.x
A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality
10.1111/j.1462-2920.2006.01236.x
Bacterial sensor kinases: Diversity in the recognition of environmental signals
10.1146/annurev.micro.112408.134054
Transcriptional Phase Variation at the flhB Gene of Pseudomonas putida DOT-T1E Is Involved in Response to Environmental Changes and Suggests the Participation of the Flagellar Export System in Solvent Tolerance
10.1128/JB.186.6.1905-1909.2004
Struggling to get a universal meningococcal vaccine and novel uses for bacterial toxins in cancer treatment
10.1111/j.1751-7915.2010.00195.x
Regulation of the cyclopropane synthase cfaB gene in Pseudomonas putida KT2440
10.1111/j.1574-6968.2011.02317.x
The Pseudomonas aeruginosa quinolone quorum sensing signal alters the multicellular behaviour of Pseudomonas putida KT2440
10.1016/j.resmic.2011.06.013
Chemical and microbiological characterization of atmospheric particulate matter during an intense african dust event in Southern Spain
10.1021/es3051235
Laboratory research aimed at closing the gaps in microbial bioremediation
10.1016/j.tibtech.2011.06.007
PhhR Binds to Target Sequences at Different Distances with Respect to RNA Polymerase in Order to Activate Transcription
10.1016/j.jmb.2009.09.045
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor
10.1002/jmr.1101
Bioremediation of polynitrated aromatic compounds: Plants and microbes put up a fight
10.1016/j.copbio.2005.03.010
Events in root colonization by pseudomonas putida
10.1007/978-94-017-9555-5_10
Søren Molin
Molin Søren
ORCID: 0000-0002-7973-2639
Paper-based sensors for rapid detection of virulence factor produced by Pseudomonas aeruginosa
10.1371/journal.pone.0194157
Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment
10.1111/j.1462-2920.2012.02795.x
Microbial ecology and adaptation in cystic fibrosis airways
10.1111/j.1462-2920.2011.02459.x
A Rhizobium leguminosarum CHDL- (Cadherin-Like-) Lectin Participates in Assembly and Remodeling of the Biofilm Matrix
10.3389/fmicb.2016.01608
Is genotyping of single isolates sufficient for population structure analysis of Pseudomonas aeruginosa in cystic fibrosis airways?
10.1186/s12864-016-2873-1
Typing of Pseudomonas aeruginosa from hemorrhagic pneumonia in mink (Neovison vison)
10.1016/j.vetmic.2012.12.003
Within-host microevolution of Pseudomonas aeruginosa in Italian cystic fibrosis patients
10.1186/s12866-015-0563-9
Distinct roles of extracellular polymeric substances in Pseudomonas aeruginosa biofilm development
10.1111/j.1462-2920.2011.02503.x
The PprA-PprB two-component system activates CupE, the first non-archetypal Pseudomonas aeruginosa chaperione-usher pathway system assembling fimbriae
10.1111/j.1462-2920.2010.02372.x
Dynamics of Mutator and Antibiotic-Resistant Populations in a Pharmacokinetic/Pharmacodynamic Model of Pseudomonas aeruginosa Biofilm Treatment
10.1128/AAC.00617-11
Phenotypes of Non-Attached Pseudomonas aeruginosa Aggregates Resemble Surface Attached Biofilm
10.1371/journal.pone.0027943
Inhibition of Escherichia coli precursor-16S rRNA processing by mouse intestinal contents
10.1046/j.1462-2920.1999.00001.x
A dual role of extracellular DNA during biofilm formation of Neisseria meningitidis
10.1111/j.1365-2958.2010.07054.x
A characterization of DNA release in Pseudomonas aeruginosa cultures and biofilms
10.1111/j.1365-2958.2005.05008.x
Early genetic adaptation associated with chronic pseudomonas aeruginosa airways infection
10.1002/ppul.22682
The gef gene from Escherichia coli is regulated at the level of translation
10.1111/j.1365-2958.1991.tb01911.x
Heterogeneity of biofilms formed by nonmucoid Pseudomonas aeruginosa isolates from patients with cystic fibrosis.
10.1128/JCM.43.10.5247-5255.2005
Evolution of the Pseudomonas aeruginosa mutational resistome in an international Cystic Fibrosis clone
10.1038/s41598-017-05621-5
Identification of Bacterial Small RNAs by RNA Sequencing
10.1007/978-1-4939-0473-0_34
Volatile metabolites from some gram-negative bacteria
10.1016/S0045-6535(97)00209-9
Polysaccharides serve as scaffold of biofilms formed by mucoid Pseudomonas aeruginosa.
10.1111/j.1574-695X.2012.00936.x
Initial Pseudomonas aeruginosa infection in patients with cystic fibrosis: characteristics of eradicated and persistent isolates
10.1111/j.1469-0691.2011.03627.x
Microfluidic dissolved oxygen gradient generator biochip as a useful tool in bacterial biofilm studies
10.1039/c003558k
Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators.
10.1371/journal.pgen.1003741
Evolutionary dynamics of bacteria in a human host environment
10.1073/pnas.1018249108
Mini-Tn7 transposons for site-specific tagging of bacteria with fluorescent proteins
10.1111/j.1462-2920.2004.00605.x
Antimicrobial activities of YycG histidine kinase inhibitors against Staphylococcus epidermidis biofilms
10.1111/j.1574-6968.2007.00749.x
The Small RNA ErsA of Pseudomonas aeruginosa Contributes to Biofilm Development and Motility through Post-transcriptional Modulation of AmrZ
10.3389/fmicb.2018.00238
Effects of Colistin on Surface Ultrastructure and Nanomechanics of Pseudomonas aeruginosa Cells
10.1021/la803898g
Root growth and exudate production define the frequency of horizontal plasmid transfer in the Rhizosphere
10.1111/j.1574-6941.2006.00229.x
Role of Extracellular DNA during Biofilm Formation by Listeria monocytogenes
10.1128/AEM.02361-09
Long-term social dynamics drive loss of function in pathogenic bacteria
10.1073/pnas.1508324112
The evolution of antimicrobial peptide resistance in Pseudomonas aeruginosa is shaped by strong epistatic interactions
10.1038/ncomms13002
Biofilm Induced Tolerance Towards Antimicrobial Peptides
10.1371/journal.pone.0001891
Loss of Social Behaviours in Populations of Pseudomonas aeruginosa Infecting Lungs of Patients with Cystic Fibrosis
10.1371/journal.pone.0083124
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene
10.1111/1462-2920.13585
Monitoring bacterial growth activity in biofilms from laboratory flow chambers, plant rhizosphere, and animal intestine
10.1016/S0076-6879(01)37004-0
Metabolic commensalism and competition in a two-species microbial consortium
10.1128/AEM.68.5.2495-2502.2002
Diversity of small RNAs expressed in Pseudomonas species
10.1111/1758-2229.12233
Selection of hyperadherent mutants in Pseudomonas putida biofilms
10.1099/mic.0.047787-0
Evolutionary remodeling of global regulatory networks during long-term bacterial adaptation to human hosts
10.1073/pnas.1221466110
Early adaptive developments of Pseudomonas aeruginosa after the transition from life in the environment to persistent colonization in the airways of human cystic fibrosis hosts
10.1111/j.1462-2920.2010.02211.x
High in vitro antimicrobial activity of β-peptoid-peptide hybrid oligomers against planktonic and biofilm cultures of Staphylococcus epidermidis.
10.1016/j.ijantimicag.2012.09.014
Draft Genome Sequences of Pseudomonas aeruginosa B3 Strains Isolated from a Cystic Fibrosis Patient Undergoing Antibiotic Chemotherapy
10.1128/genomeA.00804-13
Pseudomonas aeruginosa adaptation to lungs of cystic fibrosis patients leads to lowered resistance to phage and protist enemies.
10.1371/journal.pone.0075380
Evolutionary insight from whole-genome sequencing of Pseudomonas aeruginosa from cystic fibrosis patients
10.2217/FMB.15.3
Antimicrobial and antistaphylococcal biofilm activity from the sea urchin Paracentrotus lividus
10.1111/j.1365-2672.2009.04394.x
Effects of ginseng on Pseudomonas aeruginosa motility and biofilm formation
10.1111/j.1574-695X.2011.00787.x
Genome‐wide identification of novel small RNAs in Pseudomonas aeruginosa
10.1111/j.1462-2920.2012.02759.x
Secreted single‐stranded DNA is involved in the initial phase of biofilm formation by Neisseria gonorrhoeae
10.1111/1462-2920.12291
What Makes Pseudomonas Aeruginosa Persist in the Lungs of CF Patients?
10.1002/ppul.23297
Bacteriocin-mediated competition in cystic fibrosis lung infections
10.1098/rspb.2015.0972
Suicide Microbes on the loose
10.1038/nbt0195-35
sarA negatively regulates Staphylococcus epidermidis biofilm formation by modulating expression of 1 MDa extracellular matrix binding protein and autolysis‐dependent release of eDNA
10.1111/j.1365-2958.2012.08203.x
Identification and characterization of an N-acylhomoserine lactone-dependent quorum-sensing system in Pseudomonas putida strain IsoF
10.1128/AEM.68.12.6371-6382.2002
Microbial motility involvement in biofilm structure formation
10.2166/wst.2007.275
In situ reverse transcription-PCR for monitoring gene expression in individual Methanosarcina mazei S-6 cells
10.1128/AEM.66.5.1796-1800.2000
In situ identification of polyphosphate- and polyhydroxyalkanoate-accumulating traits for microbial populations in a biological phosphorus removal process
10.1046/j.1462-2920.2001.00164.x
Modular microfluidic system as a model of cystic fibrosis airways
10.1063/1.4742911
Antibiotic resistance of bacterial biofilms
10.1016/j.ijantimicag.2009.12.011
Collateral sensitivity cycling of antibiotics for cystic fibrosis airway
10.1016/S1569-1993(16)30365-4
Mutations in 23S rRNA Confer Resistance against Azithromycin in Pseudomonas aeruginosa
10.1128/AAC.00630-12
Differentiation and distribution of colistin- and sodium dodecyl sulfate-tolerant cells in Pseudomonas aeruginosa biofilms
10.1128/JB.00720-06
Pseudomonas aeruginosa extracellular products inhibit staphylococcal growth, and disrupt established biofilms produced by Staphylococcus epidermidis
10.1099/mic.0.028001-0
Draft Genome Sequence of Acinetobacter johnsonii C6, an Environmental Isolate Engaging in Interspecific Metabolic Interactions
10.1128/genomeA.00155-17
Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.
10.1038/nrmicro2907
Towards quantitative SERS detection of hydrogen cyanide at ppb level for human breath analysis
10.1016/j.sbsr.2015.07.002
Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa
10.1186/1471-2164-15-783
Environmental heterogeneity drives within-host diversification and evolution of Pseudomonas aeruginosa.
10.1128/mBio.01592-14
Bacterial evolution in PCD and CF patients follows the same mutational steps
10.1038/srep28732
Activity of toluene-degrading Pseudomonas putida in the early growth phase of a biofilm for waste gas treatment
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Sublethal Ciprofloxacin Treatment Leads to Rapid Development of High-Level Ciprofloxacin Resistance during Long-Term Experimental Evolution of Pseudomonas aeruginosa
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Sandwich hybridisation assay for quantitative detection of yeast RNAs in crude cell lysates
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In situ growth rates and biofilm development of Pseudomonas aeruginosa populations in chronic lung infections
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Statistical Analysis of Pseudomonas aeruginosa Biofilm Development: Impact of Mutations in Genes Involved in Twitching Motility, Cell-to-Cell Signaling, and Stationary-Phase Sigma Factor Expression
10.1128/AEM.68.4.2008-2017.2002
Gene transfer occurs with enhanced efficiency in biofilms and induces enhanced stabilisation of the biofilm structure
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Within-host evolution of Pseudomonas aeruginosa reveals adaptation toward iron acquisition from hemoglobin.
10.1128/mBio.00966-14
Quantification of Leuconostoc populations in mixed dairy starter cultures using fluorescence in situ hybridization
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Characterization of a Pseudomonas putida rough variant evolved in a mixed species biofilm with Acinetobacter sp. strain C6
10.1128/JB.00041-07
Evolution and diversification of Pseudomonas aeruginosa in the paranasal sinuses of cystic fibrosis children have implications for chronic lung infection
10.1038/ismej.2011.83
Electrochemical sensing of biomarker for diagnostics of bacteria-specific infections
10.2217/nnm-2016-0155
Novel experimental Pseudomonas aeruginosa lung infection model mimicking long-term host-pathogen interactions in cystic fibrosis
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Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E
10.1111/1462-2920.12775
Evaluation of Enoyl-Acyl Carrier Protein Reductase Inhibitors as Pseudomonas aeruginosa Quorum-Quenching Reagents
10.3390/molecules15020780
Combating biofilms
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Lipopolysaccharide’s role in the association of Salmonella cells to the mouse intestine studied by ribosomal in situ hybridization
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Formation and properties of in vitro biofilms of ica-negative Staphylococcus epidermidis clinical isolates
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Sodium Dodecyl Sulfate (SDS)-Loaded Nanoporous Polymer as Anti-Biofilm Surface Coating Material
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Antibiotic combination therapy can select for broad-spectrum multidrug resistance in Pseudomonas aeruginosa
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Synergistic Activities of an Efflux Pump Inhibitor and Iron Chelators against Pseudomonas aeruginosa Growth and Biofilm Formation
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Adhesive properties of Staphylococcus epidermidis probed by atomic force microscopy
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Pseudomonas aeruginosa and Saccharomyces cerevisiae Biofilm in Flow Cells
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Fast Selective Detection of Pyocyanin Using Cyclic Voltammetry
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SERS detection of the biomarker hydrogen cyanide from Pseudomonas aeruginosa cultures isolated from cystic fibrosis patients
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Organic compounds inhibiting S. epidermidis adhesion and biofilm formation
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Current understanding of multi-species biofilms
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Pattern differentiation in co-culture biofilms formed by Staphylococcus aureus and Pseudomonas aeruginosa
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Diversity of metabolic profiles of cystic fibrosis Pseudomonas aeruginosa during the early stages of lung infection
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Staphylococcus epidermidis recovered from indwelling catheters exhibit enhanced biofilm dispersal and "self-renewal" through downregulation of agr
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Evolution and Adaptation in Pseudomonas aeruginosa Biofilms Driven by Mismatch Repair System-Deficient Mutators
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Coexistence and Within-Host Evolution of Diversified Lineages of Hypermutable Pseudomonas aeruginosa in Long-term Cystic Fibrosis Infections
10.1371/journal.pgen.1004651
Molecular epidemiology and dynamics of Pseudomonas aeruginosa populations in lungs of cystic fibrosis patients
10.1128/IAI.01282-06
Planktonic replication is essential for biofilm formation by Legionella pneumophila in a complex medium under static and dynamic flow conditions
10.1128/AEM.72.4.2885-2895.2006
A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production
10.1016/j.gene.2011.11.005
Diversity, Prevalence, and Longitudinal Occurrence of Type II Toxin-Antitoxin Systems of Pseudomonas aeruginosa Infecting Cystic Fibrosis Lungs
10.3389/fmicb.2017.01180
Mucoid Pseudomonas aeruginosa isolates maintain the biofilm formation capacity and the gene expression profiles during the chronic lung infection of CF patients
10.1111/j.1600-0463.2011.02726.x
Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system
10.1128/AEM.71.12.8611–8617.2005
Evidence of increased spread and establishment of plasmid RP4 in the intestine under sub-inhibitory tetracycline concentrations
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Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis.
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SERS spectroscopy for detection of hydrogen cyanide in breath from children colonised with P. aeruginosa
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Is there a role for quorum sensing signals in bacterial biofilms?
10.1016/S1369-5274(02)00325-9
In vitro anti-Gram-positive and antistaphylococcal biofilm activity of newly halogenated pyrroles related to pyrrolomycins
10.1016/j.ijantimicag.2007.10.013
Structure-based discovery of inhibitors of the YycG histidine kinase
10.1186/1471-2180-6-96
Novel Essential Role of Ethanol Oxidation Genes at Low Temperature Revealed by Transcriptome Analysis in the Antarctic Bacterium Pseudomonas extremaustralis
10.1371/journal.pone.0145353
Transcriptional regulation of pWW0 transfer genes in Pseudomonas putida KT2440
10.1016/j.plasmid.2004.06.005
A bioluminescent derivative of Pseudomonas putida KT2440 for deliberate release into the environment
10.1111/j.1574-6941.2000.tb00758.x
Convergent Metabolic Specialization through Distinct Evolutionary Paths in Pseudomonas aeruginosa
10.1128/mBio.00269-18
Colistin-Tobramycin Combinations Are Superior to Monotherapy Concerning the Killing of Biofilm Pseudomonas aeruginosa
10.1086/656788
Archetypal analysis of diverse Pseudomonas aeruginosa transcriptomes reveals adaptation in cystic fibrosis airways
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Role of autolysin-mediated DNA-release in biofilm formation of Staphylococcus epidermidis
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A Mig-14-like protein (PA5003) affects antimicrobial peptide recognition in Pseudomonas aeruginosa
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Role of Cell Death and Autolysis for DNA Release and Biofilm Development in Neisseria meningitidis
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Suicidal genetic elements and their use in biological containment of bacteria
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Topographic analysis of the toxic Gef protein from Escherichia coli
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Bacterial adaptation during chronic infection revealed by independent component analysis of transcriptomic data
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Development of Spatial Distribution Patterns by Biofilm Cells
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Augmented effect of early antibiotic treatment in mice with experimental lung infections due to sequentially adapted mucoid strains of Pseudomonas aeruginosa
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Effect of Oxygen Limitation and Starvation on the Benzalkonium Chloride Susceptibility of Escherichia coli
10.1111/j.1365-2672.2008.03901.x
Microaerophilic alkane degradation in Pseudomonas extremaustralis: a transcriptomic and physiological approach
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Evolutionary Highways to Persistent Bacterial Infection
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Privatisation rescues function following loss of cooperation
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Drug-Driven Phenotypic Convergence Supports Rational Treatment Strategies of Chronic Infections
10.1016/j.cell.2017.12.012
High-resolution in situ transcriptomics of Pseudomonas aeruginosa unveils genotype independent patho-phenotypes in cystic fibrosis lungs
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Mutations causing low level antibiotic resistance ensure bacterial survival in antibiotic-treated hosts
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Privatisation rescues function following loss of cooperation
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High persister phenotype of Pseudomonas Aeruginosa is associated with increased fitness in cystic fibrosis airways
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Evolutionary highways to persistent bacterial infection
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The high persister phenotype of Pseudomonas aeruginosa is associated with increased fitness and persistence in cystic fibrosis airways
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Filamentous bacteriophages are associated with chronic Pseudomonas lung infections and antibiotic resistance in cystic fibrosis
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Hypermutator Pseudomonas aeruginosa exploits multiple genetic pathways to develop multidrug resistance during long-term infections in the airways of cystic fibrosis patients
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Oxidative stress under low oxygen conditions triggers hyperflagellation and motility in the Antarctic bacterium Pseudomonas extremaustralis
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Structure of Pseudomonas aeruginosa ribosomes from an aminoglycoside-resistant clinical isolate
10.1073/pnas.1909831116
Adapting to the airways: Metabolic requirements of Pseudomonas aeruginosa during the infection of cystic fibrosis patients
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Nanograss sensor for selective detection of Pseudomonas aeruginosa by pyocyanin identification in airway samples
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Antibiotic resistance in Pseudomonas aeruginosa and adaptation to complex dynamic environments
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Visualizing the invisible: class excursions to ignite children's enthusiasm for microbes
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Electrochemical Detection of Pyocyanin as a Biomarker for Pseudomonas aeruginosa: A Focused Review
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Microcontainer Delivery of Antibiotic Improves Treatment of Pseudomonas aeruginosa Biofilms
10.1002/adhm.201901779
Bacterial Cell Cultures in a Lab-on-a-Disc: A Simple and Versatile Tool for Quantification of Antibiotic Treatment Efficacy
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Antibiotic resistance: turning evolutionary principles into clinical reality
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Gene Loss and Acquisition in Lineages of Pseudomonas aeruginosa Evolving in Cystic Fibrosis Patient Airways
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Bacterial persisters in long-term infection: Emergence and fitness in a complex host environment
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Hypermutator Pseudomonas aeruginosa Exploits Multiple Genetic Pathways To Develop Multidrug Resistance during Long-Term Infections in the Airways of Cystic Fibrosis Patients
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Omics-based tracking of Pseudomonas aeruginosa persistence in "eradicated" CF patients
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Co-delivery of ciprofloxacin and colistin using microcontainers for bacterial biofilm treatment
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Enhanced Eradication of Mucin‐Embedded Bacterial Biofilm by Locally Delivered Antibiotics in Functionalized Microcontainers
10.1002/mabi.202100150
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
Carlos Molina-Santiago
Molina-Santiago Carlos
/ Molina-Santiago, C
ORCID: 0000-0002-1131-8917
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
GtrS and GltR form a two-component system: the central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa.
10.1093/nar/gku496
Bactericidal and bacteriostatic antibiotics and the Fenton reaction.
10.1111/1751-7915.12120
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance.
10.1111/1462-2920.12368
Fructooligosacharides reduce Pseudomonas aeruginosa PAO1 pathogenicity through distinct mechanisms.
10.1371/journal.pone.0085772
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital
10.1371/journal.pone.0081604
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor.
10.1128/JB.00589-13
Antibiotic adjuvants: identification and clinical use.
10.1111/1751-7915.12044
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.
10.1128/AAC.05398-11
Directed evolution, natural products for cancer chemotherapy, and micro-biosensing robots.
10.1111/j.1751-7915.2011.00267.x
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
A Pseudomonas putida double mutant deficient in butanol assimilation: a promising step for engineering a biological biofuel production platform.
10.1093/femsle/fnw018
Understanding butanol tolerance and assimilation in Pseudomonas putida BIRD-1: an integrated omics approach.
10.1111/1751-7915.12328
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli
10.1111/1758-2229.12553
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J
10.1111/1758-2229.12245
Diversity of small RNAs expressed in Pseudomonas species
10.1111/1758-2229.12233
Insights in a novel gram‐positive type IV secretion system
10.1111/1462-2920.14296
The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization
10.1038/s41467-019-09944-x
Microbiomes as the new keystone for life sciences development
10.1111/1751-7915.13424
Chemical fertilization: a short‐term solution for plant productivity?
10.1111/1751-7915.13515
Dual functionality of the amyloid protein TasA in Bacillus physiology and fitness on the phylloplane
10.1038/s41467-020-15758-z
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages.
10.1016/j.foodchem.2019.125290
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
The race for antimicrobials in the multidrug resistance era.
10.1111/1751-7915.12884
More than words: the chemistry behind the interactions in the plant holobiont
10.1111/1462-2920.15197