Minimally-destructive atmospheric ionisation mass spectrometry authenticates authorship of historical manuscripts
James Newton
Gordon Ramage
Nikolaj Gadegaard
William Zachs
Simon Rogers
Michael P. Barrett
Gerard Carruthers
Karl Burgess
Scientific Reports, 2018-12
Karl Burgess
Burgess Karl
ORCID: 0000-0002-0881-715X
Enhanced acylcarnitine annotation in high-resolution mass spectrometry data: fragmentation analysis for the classification and annotation of acylcarnitines.
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Untargeted metabolomic analysis of miltefosine action in Leishmania infantum reveals changes to the internal lipid metabolism.
10.1016/j.ijpddr.2013.11.002
Strategies to dissect parasite proteomes.
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Recent advances in liquid and gas chromatography methodology for extending coverage of the metabolome
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A novel targeted/untargeted GC-Orbitrap metabolomics methodology applied to Candida albicans and Staphylococcus aureus biofilms
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MetaboCraft: building a Minecraft plugin for metabolomics
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Minimally-destructive atmospheric ionisation mass spectrometry authenticates authorship of historical manuscripts
10.1038/s41598-018-28810-2
Plasma Itaconate elevation following successful cDMARD treatment in early rheumatoid arthritis patients elucidates disease activity associated macrophage activation
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Changing environments and genetic variation: natural variation in inbreeding does not compromise short-term physiological responses
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Functional colour genes and signals of selection in colour‐polymorphic salamanders
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Decomposing metabolite set activity levels with PALS
10.1101/2020.06.07.138974
Schistosoma haematobium infection is associated with alterations in energy and purine-related metabolism in preschool-aged children
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Ranking Metabolite Sets by Their Activity Levels
10.3390/metabo11020103
Nikolaj Gadegaard
Gadegaard Nikolaj
ORCID: 0000-0002-3396-846X
3D Printed Tooling for Injection Moulded Microfluidics
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A genomics approach in determining nanotopographical effects on MSC phenotype
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Development of a conducting polymer cell impedance sensor
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Label-Free Segmentation of Co-cultured Cells on a Nanotopographical Gradient
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Nanotopographical Cues Augment Mesenchymal Differentiation of Human Embryonic Stem Cells
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Self-folding nano- and micropatterned hydrogel tissue engineering scaffolds by single step photolithographic process
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The Development of a epsilon-Polycaprolactone Scaffold for Central Nervous System Repair
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Tunable BODIPY derivatives amenable to 'click' and peptide chemistry
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A Dual Gradient Assay for the Parametric Analysis of Cell-Surface Interactions
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A miniaturized bioreactor system for the evaluation of cell interaction with designed substrates in perfusion culture
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Direct nanopatterning of commercially pure titanium with ultra-nanocrystalline diamond stamps
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Enhanced light extraction in ITO-free OLEDs using double-sided printed electrodes
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Full-Thickness Characterization of Plasma Polymerized Hexane Films Irradiated by an Electron Beam
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Induced Chirality through Electromagnetic Coupling between Chiral Molecular Layers and Plasmonic Nanostructures
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Injection Moulding Difficult Nanopatterns with Hybrid Polymer Inlays
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Single-step 3D nanolithography using plasma polymerized hexane films
10.1016/j.mee.2012.07.054
Using Nanotopography and Metabolomics to Identify Biochemical Effectors of Multipotency
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Compact LED based nanoimprinter for UV-NIL
10.1016/j.mee.2011.06.023
Nanoscale surfaces for the long-term maintenance of mesenchymal stem cell phenotype and multipotency
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Nanotopography induced osteogenic differentiation of human stem cells
10.1016/j.bone.2011.03.177
Polyelectrolyte multilayers generated in a microfluidic device with pH gradients direct adhesion and movement of cells
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Protein Expression of STRO-1 Cells in Response to Different Topographic Features.
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The interactions of astrocytes and fibroblasts with defined pore structures in static and perfusion cultures
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A Biodegradable and Biocompatible Regular Nanopattern for Large-Scale Selective Cell Growth
10.1002/smll.201000193
Biodegradable microgrooved polymeric surfaces obtained by photolithography for skeletal muscle cell orientation and myotube development
10.1016/j.actbio.2009.12.040
Control of crystal polymorph in microfluidics using molluscan 28 kDa Ca2+-binding protein
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Electrical properties of in-situ grown and transferred organic nanofibers
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Electron beam lithography using plasma polymerized hexane as resist
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Nanopatterned UV curable hydrogels for biomedical applications
10.1016/j.mee.2009.11.089
Preparation of Caco-2 cell sheets using plasma polymerised acrylic acid as a weak boundary layer
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Surface strategies for control of neuronal cell adhesion: A review
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Ultrasensitive detection and characterization of biomolecules using superchiral fields
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A Hierarchical Response of Cells to Perpendicular Micro- and Nanometric Textural Cues
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A High-Throughput Assay of Cell-Surface Interactions using Topographical and Chemical Gradients
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Asymmetric photoelectron transmission through chirally-sculpted, polycrystalline gold
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Effect of Sessile Drop Volume on the Wetting Anisotropy Observed on Grooved Surfaces
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Fixation and Drying Protocols for the Preparation of Cell Samples for Time-of-Flight Secondary Ion Mass Spectrometry Analysis
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Influence of the Plasma Sheath on Plasma Polymer Deposition in Advance of a Mask and down Pores
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Interactions with nanoscale topography: Adhesion quantification and signal transduction in cells of osteogenic and multipotent lineage
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Micropatterned Surfaces with Covalently Grafted Unsymmetrical Polyoxometalate-Hybrid Clusters Lead to Selective Cell Adhesion
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Nanofabrication of two-dimensional arrays of magnetite particles for fundamental rock magnetic studies
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Proteomic analysis of human osteoprogenitor response to disordered nanotopography
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Screening of Biomineralization Using Microfluidics
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Supramolecular Silver Polyoxometalate Architectures Direct the Growth of Composite Semiconducting Nanostructures
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The use of nanoscale topography to modulate the dynamics of adhesion formation in primary osteoblasts and ERK/MAPK signalling in STRO-1+enriched skeletal stem cells
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Use of Neutron Reflectivity to Measure the Dynamics of Solvation and Structural Changes in Polyvinylferrocene Films During Electrochemically Controlled Redox Cycling
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Whole proteome analysis of osteoprogenitor differentiation induced by disordered nanotopography and mediated by ERK signalling
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A hybrid three-dimensional nanofabrication method for producing vascular tissue engineering scaffold
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Biodegradable polymer tubes with litho graphically controlled 3D micro- and nanotopography
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Design of hydrophobic polyoxometalate hybrid assemblies beyond surfactant encapsulation
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High-energy electron beam lithography of octadecylphosphonic acid monolayers on aluminum
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Optimizing substrate disorder for bone tissue engineering of mesenchymal stem cells
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Reversible electron-transfer reactions within a nanoscale metal oxide cage mediated by metallic substrates
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The response of fibroblasts to hexagonal nanotopography fabricated by electron beam lithography
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Direct stamp fabrication for NIL and hot embossing using HSQ
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From polyoxometalate building blocks to polymers and materials: the silver connection
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Group analysis of regulation of fibroblast genome on low-adhesion nanostructures
10.1016/j.biomaterials.2006.11.049
Incorporation of N-heterocyclic cations into proteins with a highly directed chemical modification
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Nanomechanotransduction and interphase nuclear organization influence on genomic control
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Nanotopographical stimulation of mechanotransduction and changes in interphase centromere positioning
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Osteoprogenitor response to low-adhesion nanotopographies originally fabricated by electron beam lithography
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Regulation of implant surface cell adhesion: Characterization and quantification of S-phase primary osteoblast adhesions on biomimetic nanoscale substrates
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Supramolecular assembly facilitating adsorbate-induced chiral electronic states in a metal surface
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The control of human mesenchymal cell differentiation using nanoscale symmetry and disorder
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The effects of nanoscale pits on primary human osteoblast adhesion formation and cellular spreading
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The influence of nanoscale biomimetic structures on osteoblast adhesion
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The influence of nanoscale structures on osteoblast adhesion
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3D polymer scaffolds for tissue engineering
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Air-trapping on biocompatible nanopatterns
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Applications of nano-patterning to tissue engineering
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Atomic force microscopy in biology: technology and techniques
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Cell signaling arising from nanotopography: implications for nanomedical devices
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Fluorescent aromatic platforms for cell patterning
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Nanoprinting onto cells
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On the injection molding of nanostructured polymer surfaces
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Optical heating for short hot embossing cycle times
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Progress towards tubes with regular nanopatterned inner surfaces
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Evaluating the influence of deposition conditions on solvation of reactive conducting polymers with neutron reflectivity
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Superhydrophobicity and superhydrophilicity of regular nanopatterns
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Cells react to nanoscale order and symmetry in their surroundings
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Dynamic in situ electrochemical neutron reflectivity measurements
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Investigating filopodia sensing using arrays of defined nano-pits down to 35 nm diameter in size
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Rapid fibroblast adhesion to 27 nm high polymer demixed nano-topography
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The effects of collagen type I topography on myoblasts in vitro
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Tubes with controllable internal nanotopography
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Arrays of nano-dots for cellular engineering
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Covalent attachment of poly(ethylene glycol) to surfaces, critical for reducing bacterial adhesion
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Quantification of grafted poly(ethylene glycol)-silanes on silicon by time-of-flight secondary ion mass spectrometry
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Volume change in polypyrrole studied by atomic force microscopy
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"Superchiral" Spectroscopy: Detection of Protein Higher Order Hierarchical Structure with Chiral Plasmonic Nanostructures
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A Novel, Organic, UV-Sensitive Resist Ideal for Nanoimprint-, Photo- and Laser Lithography in an Air Atmosphere
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Nanoscale stimulation of osteoblastogenesis from mesenchymal stem cells: nanotopography and nanokicking
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Nanotopography and Plasma Treatment: Redesigning the Surface for Vascular Graft Endothelialisation
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Osteoclastogenesis/osteoblastogenesis using human bone marrow-derived cocultures on nanotopographical polymer surfaces
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Osteoclastogenesis/osteoblastogenesis using human bone marrow-derived cocultures on nanotopographical polymer surfaces (vol 10, pg 949, 2015)
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Ozone oxidation methods for aluminum oxide formation: Application to low-voltage organic transistors
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Strategies for High Quality Injection Moulding of Polymer Nanopillars
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Design and fabrication of memory devices based on nanoscale polyoxometalate clusters
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Development of a Novel 3D Culture System for Screening Features of a Complex Implantable Device for CNS Repair
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Direct micrometer patterning and functionalization of polymer blend surfaces by using hot embossing
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Harnessing nanotopography and integrin-matrix interactions to influence stem cell fate
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Injection moulding of ultra high aspect ratio nanostructures using coated polymer tooling
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Luminal Surface Engineering, 'Micro and Nanopatterning': Potential for Self Endothelialising Vascular Grafts?
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Micro/Nano Biotechnologies and Systems 2013
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Microfabrication of sharp blazed gratings by a two-step height amplification process based on soft and deep X-ray lithography
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Nanotopographical Effects on Mesenchymal Stem Cell Morphology and Phenotype
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Nanotopographical Induction of Osteogenesis through Adhesion, Bone Morphogenic Protein Cosignaling, and Regulation of MicroRNAs
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Nanotopology potentiates growth hormone signalling and osteogenesis of mesenchymal stem cells
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A bio-inspired neural environment to control neurons comprising radial glia, substrate chemistry and topography
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Increased efficiency of direct nanoimprinting on planar and curved bulk titanium through surface modification
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The origin of off-resonance non-linear optical activity of a gold chiral nanomaterial
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Spatial control of chemical processes on nanostructures through nano-localized water heating
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Fabrication of mesoscale topographical gradients in bulk titanium and their use in injection moulding
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Image based Machine Learning for identification of macrophage subsets
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Influence of biomaterial nanotopography on the adhesive and elastic properties of Staphylococcus aureus cells
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Nacre Topography Produces Higher Crystallinity in Bone than Chemically Induced Osteogenesis
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Controlling Metamaterial Transparency with Superchiral Fields
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Superchiral Plasmonic Phase Sensitivity for Fingerprinting of Protein Interface Structure
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Controlling fluid flow to improve cell seeding uniformity
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Rho Kinase Inhibition by AT13148 Blocks Pancreatic Ductal Adenocarinoma Invasion and Tumor Growth
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Chiral Plasmonic Fields Probe Structural Order of Biointerfaces
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Minimally-destructive atmospheric ionisation mass spectrometry authenticates authorship of historical manuscripts
10.1038/s41598-018-28810-2
Predicting phenotype using morphological cell responses to nanotopography
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Nanotopography reveals metabolites that maintain the immunosuppressive phenotype of mesenchymal stem cells
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Customizable, engineered substrates for rapid screening of cellular cues
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Probing the nanoscale organisation and multivalency of cell surface receptors: DNA origami nanoarrays for cellular studies with single-molecule control
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Probing Specificity of Protein–Protein Interactions with Chiral Plasmonic Nanostructures
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Biomacromolecular charge chirality detected using chiral plasmonic nanostructures
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Customizable, engineered substrates for rapid screening of cellular cues
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Interactive machine learning for fast and robust cell profiling
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Predicting gene expression using morphological cell responses to nanotopography
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Sol-Gel Coatings for Subaquatic Self-Cleaning Windows
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A unified contact force-dependent model for triboelectric nanogenerators accounting for surface roughness
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Nanotopography controls single-molecule mobility to determine overall cell fate
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Interactive machine learning for fast and robust cell profiling
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Controlling the symmetry of inorganic ionic nanofilms with optical chirality
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Active Chiral Plasmonics: Flexoelectric Control of Nanoscale Chirality
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Simon Rogers
Rogers Simon
ORCID: 0000-0003-3578-4477
An Optimal Frequency in Ca2+ Oscillations for Stomatal Closure Is an Emergent Property of Ion Transport in Guard Cells
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Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets.
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MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach.
10.1093/bioinformatics/btu370
Probabilistic assignment of formulas to mass peaks in metabolomics experiments.
10.1093/bioinformatics/btn642
Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models.
10.1093/bioinformatics/btn553
Bayesian model-based inference of transcription factor activity.
10.1186/1471-2105-8-S2-S2
Identification of prognostic signatures in breast cancer microarray data using Bayesian techniques.
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A Bayesian regression approach to the inference of regulatory networks from gene expression data.
10.1093/bioinformatics/bti487
The latent process decomposition of cDNA microarray data sets.
10.1109/TCBB.2005.29
HDP-Align: Hierarchical Dirichlet Process Clustering for Multiple Peak Alignment of Liquid Chromatography Mass Spectrometry Data
10.1101/074831
Topic modeling for untargeted substructure exploration in metabolomics
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Global Sensitivity Analysis of OnGuard Models Identifies Key Hubs for Transport Interaction in Stomatal Dynamics
10.1104/pp.17.00170
Unexpected Connections between Humidity and Ion Transport Discovered Using a Model to Bridge Guard Cell-to-Leaf Scales
10.1105/tpc.17.00694
Minimally-destructive atmospheric ionisation mass spectrometry authenticates authorship of historical manuscripts
10.1038/s41598-018-28810-2
Deciphering complex metabolite mixtures by unsupervised and supervised substructure discovery and semi-automated annotation from MS/MS spectra
10.1101/491506
Deciphering complex metabolite mixtures by unsupervised and supervised substructure discovery and semi-automated annotation from MS/MS spectra
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MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools
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EZ-Root-VIS: A Software Pipeline for the Rapid Analysis and Visual Reconstruction of Root System Architecture
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MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools
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In-silico Optimisation of Mass Spectrometry Fragmentation Strategies in Metabolomics
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In Silico Optimization of Mass Spectrometry Fragmentation Strategies in Metabolomics
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Gestational-age-dependent development of the neonatal metabolome
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Universal MS/MS Visualization and Retrieval with the Metabolomics Spectrum Resolver Web Service
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Predicting host taxonomic information from viral genomes: A comparison of feature representations
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Decomposing metabolite set activity levels with PALS
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Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions
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matchms - processing and similarity evaluation of mass spectrometry data
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Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships
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Probabilistic Framework for Integration of Mass Spectrum and Retention Time Information in Small Molecule Identification
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matchms - processing and similarity evaluation of mass spectrometry data.
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Rapid Development of Improved Data-dependent Acquisition Strategies
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User guide to the red blood cell model (RCM), a multiplatform JAVA-based model of human red blood cell homeostasis
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Probabilistic framework for integration of mass spectrum and retention time information in small molecule identification
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Comparative Metabologenomics Analysis of Polar Actinomycetes
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Ranking Metabolite Sets by Their Activity Levels
10.3390/metabo11020103
Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships
10.1371/journal.pcbi.1008724
Up-down biphasic volume response of human red blood cells to PIEZO1 activation during capillary transits
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PIEZO1 and the mechanism of the long circulatory longevity of human red blood cells
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Rapid Development of Improved Data-Dependent Acquisition Strategies
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Advances in decomposing complex metabolite mixtures using substructure- and network-based computational metabolomics approaches
10.1039/D1NP00023C
Using topic modeling to detect cellular crosstalk in scRNA-seq
10.1101/2021.07.26.453767
