Whole-genome analysis of Azoarcus sp strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features
Martin-Moldes, Zaira
Teresa Zamarro, Maria
del Cerro, Carlos
Valencia, Ana
Jose Gomez, Manuel
Arcas, Aida
Udaondo, Zulema
Luis Garcia, Jose
Nogales, Juan
Carmona, Manuel
Diaz, Eduardo
Systematic and applied microbiology, 2015-10
José Luis García López
García López José Luis
/ Garcia JL
ORCID: 0000-0002-9238-2485
Role of Asp-9 and Glu-36 in the Active Site of the Pneumococcal CPL1 Lysozyme: An Evolutionary Perspective of Lysozyme Mechanism
10.1021/bi00151a016
Single-Step Purification on DEAE-sephacel of recombinant polypeptides produced in Escherichia Coli
10.1038/nbt0792-795
New tool for spreading proteins to the environment: Cry1Ab toxin immobilized to bioplastics
10.1007/s00253-005-0257-6
Carbon roadmap from syngas to polyhydroxyalkanoates in Rhodospirillum rubrum
10.1111/1462-2920.13087
Engineering synthetic bacterial consortia for enhanced desulfurization and revalorization of oil sulfur compounds
10.1016/j.ymben.2016.01.005
In vivo immobilization of fusion proteins on bioplastics by the novel tag BioF
10.1128/AEM.70.6.3205-3212.2004
Crystal structure of CbpF, a bifunctional choline-binding protein and autolysis regulator from Streptococcus pneumoniae
10.1038/embor.2008.245
Insights into the structure-function relationships of pneumococcal cell wall lysozymes, LytC and Cpl-1
10.1074/jbc.M802808200
Characterization of the last step of the aerobic phenylacetic acid degradation pathway
10.1099/mic.0.2006/002444-0
Biochemical evidence that phaZ gene encodes a specific intracellular medium chain length polyhydroxyalkanoate depolymerase in Pseudomonas putida KT2442: Characterization of a paradigmatic enzyme
10.1074/jbc.M608119200
The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB
10.1128/JB.186.17.5762-5774.2004
Identification of the Geobacter metallireducens BamVW Two-Component System, Involved in Transcriptional Regulation of Aromatic Degradation
10.1128/AEM.02255-09
Modular organization of the lytic enzymes of Streptococcus pneumoniae and its bacteriophages
10.1016/0378-1119(90)90116-9
Infection of Streptococcus oralis NCTC 11427 by pneumococcal phages
10.1111/j.1574-6968.1989.tb03620.x
Interchange of functional domains switches enzyme specificity: construction of a chimeric pneumococcal‐clostridial cell wall lytic enzyme
10.1111/j.1365-2958.1993.tb01231.x
Activity over lactose and ONPG of a genetically engineered β-galactosidase from Escherichia coli in solution and immobilized: Kinetic modelling
10.1016/S0141-0229(01)00366-0
The role of GlpR repressor in Pseudomonas putida KT2440 growth and PHA production from glycerol
10.1111/j.1462-2920.2012.02790.x
Structural analysis and biological significance of the cell wall lytic enzymes of Streptococcus pneumoniae and its bacteriophage
10.1016/0378-1097(92)90243-H
Purification and polar localization of pneumococcal LytB, a putative endo-β-N-acetylglucosaminidase: The chain-dispersing murein hydrolase
10.1128/JB.184.18.4988-5000.2002
1,3-propanediol production by Klebsiella oxytoca NRRL-B199 from glycerol. Medium composition and operational conditions
10.1016/j.btre.2014.12.010
Cloning and sequencing of the pac gene encoding the penicillin G acylase of Bacillus megaterium ATCC 14945
10.1016/0378-1097(94)00510-X
Insights on the regulation of the phenylacetate degradation pathway from Escherichia coli
10.1111/1758-2229.12117
New insights into the regulation of the pac gene from Escherichia coli W ATCC 11105
10.1016/S0378-1097(99)00281-5
Evaluation of different enzymes as catalysts for the production of β-lactam antibiotics following a kinetically controlled strategy
10.1016/S0141-0229(99)00050-2
A finely tuned regulatory circuit of the nicotinic acid degradation pathway in Pseudomonas putida
10.1111/j.1462-2920.2011.02471.x
Selective adsorption of poly-His tagged glutaryl acylase on tailor-made metal chelate supports
10.1016/S0021-9673(99)00489-6
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features
10.1016/j.syapm.2015.07.002
Production of a thermoresistant alpha-galactosidase from Thermus sp. strain T2 for food processing
10.1080/08905430701191221
Identification of the 4-hydroxyphenylacetate transport gene of Esherichia coli W: Construction of a highly sensitive cellular biosensor
10.1016/S0014-5793(97)01012-0
Affinity chromatography of polyhistidine tagged enzymes - New dextran-coated immobilized metal ion affinity chromatography matrices for prevention of undesired multipoint adsorptions
10.1016/S0021-9673(01)00626-4
Structural characterization of the unligated and choline-bound forms of the major pneumococcal autolysin LytA amidase: Conformational transitions induced by temperature
10.1074/jbc.271.46.29152
Genetically engineered Pseudomonas: A factory of new bioplastics with broad applications
10.1046/j.1462-2920.2001.00224.x
Newly discovered penicillin acylase activity of aculeacin A acylase from Actinoplanes utahensis
10.1128/AEM.00452-07
Superimposed Levels of Regulation of the 4-Hydroxyphenylacetate Catabolic Pathway in Escherichia coli
10.1074/jbc.M103033200
Erratum: Crystal structure of CbpF, a bifunctional choline-binding protein and autolysis regulator from Streptococcus pneumoniae (EMBO Reports (2009) vol. 10 (246-251) 10.1038/embor.2008.245)
10.1038/embor.2009.57
Nucleoid-associated PhaF phasin drives intracellular location and segregation of polyhydroxyalkanoate granules in Pseudomonas putida KT2442
10.1111/j.1365-2958.2010.07450.x
Selective and mild adsorption of large proteins on lowly activated immobilized metal ion affinity chromatography matrices: Purification of multimeric thermophilic enzymes overexpressed in Escherichia coli
10.1016/j.chroma.2004.08.141
Unravelling the structure of the pneumococcal autolytic lysozyme
10.1042/BJ20050612
Novel biodegradable aromatic plastics from a bacterial source. Genetic and biochemical studies on a route of the phenylacetyl-CoA catabolon
10.1074/jbc.274.41.29228
Insights into pneumococcal pathogenesis from the crystal structure of the modular teichoic acid phosphorylcholine esterase Pce
10.1038/nsmb940
Crystallization and preliminary X-ray diffraction studies of the complete modular endolysin from Cp-1, a phage infecting Streptococcus pneumoniae
10.1107/S0907444902011563
Characterization of a novel immobilized biocatalyst obtained by matrix-assisted refolding of recombinant polyhydroxyoctanoate depolymerase from Pseudomonas putida KT2442 isolated from inclusion bodies
10.1007/s10295-010-0898-z
Overexpression of penicillin V acylase from Streptomyces lavendulae and elucidation of its catalytic residues
10.1128/AEM.02352-14
Structure of proline iminopeptidase from Xanthomonas campestris pv. citri: A prototype for the prolyl oligopeptidase family
10.1093/emboj/17.1.1
Inhibition of recombinant D-amino acid oxidase from trigonopsis variabilis by salts
10.4061/2011/158541
Biochemical characterization of the transcriptional regulator BzdR from Azoarcus sp. CIB
10.1074/jbc.M110.143503
Deciphering the transcriptional regulation of cholesterol catabolic pathway in mycobacteria: Identification of the inducer of KstR repressor
10.1074/jbc.M113.545715
Studies on the structure and function of the N‐terminal domain of the pneumococcal murein hydrolases
10.1111/j.1365-2958.1992.tb01542.x
Molecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440: The prototype of a new subgroup of extradiol dioxygenases
10.1074/jbc.M502585200
Monitoring Escherichia coli growth in M63 media by ultrasonic noninvasive methods and correlation with spectrophotometric and HPLC techniques
10.1007/s00253-009-2318-8
Escherichia coli mhpR gene expression is regulated by catabolite repression mediated by the cAMP-CRP complex
10.1099/mic.0.043620-0
Catabolism of phenylacetic acid in Escherichia coli: Characterization of a new aerobic hybrid pathway
10.1074/jbc.273.40.25974
Elucidation of the molecular recognition of bacterial cell wall by modular pneumococcal phage endolysin CPL-1
10.1074/jbc.M704317200
Molecular characterization of PadA, a phenylacetaldehyde dehydrogenase from Escherichia coli
10.1016/S0014-5793(97)00228-7
Molecular determinants of the hpa regulatory system of Escherichia coli: The HpaR repressor
10.1093/nar/gkg851
Disruption of β-oxidation pathway in Pseudomonas putida KT2442 to produce new functionalized PHAs with thioester groups
10.1007/s00253-011-3099-4
Overproduction and rapid purification of the amidase of Streptococcus pneumoniae
10.1007/BF00423136
Reconstruction and expression of the autolytic gene from Clostridium acetobutylicum ATCC 824 in Escherichia coli
10.1016/0378-1097(92)90730-C
Insights into pneumococcal fratricide from the crystal structures of the modular killing factor LytC
10.1038/nsmb.1817
Biological role of the pneumococcal amidase: Cloning of the lytA gene in Streptococcus pneumoniae
10.1111/j.1432-1033.1987.tb11172.x
Molecular characterization of an autolysin-defective mutant of Streptococcus pneumoniae
10.1016/0006-291X(86)91122-8
Identification of atypical strains of Streptococcus pneumoniae by a specific DNA probe
10.1007/BF01979468
Complete mitochondrial genome of Polymastia littoralis (Demospongiae, Polymastiidae)
10.3109/19401736.2014.892092
Stabilization of a tetrameric enzyme (α-amino acid ester hydrolase from Acetobacter turbidans) enables a very improved performance of ampicillin synthesis
10.1016/S1381-1177(00)00065-5
A highly conserved mycobacterial cholesterol catabolic pathway
10.1111/1462-2920.12108
Unravelling the gallic acid degradation pathway in bacteria: The gal cluster from Pseudomonas putida
10.1111/j.1365-2958.2010.07448.x
Cloning and expression of the pneumococcal autolysin gene in Escherichia coli
10.1007/BF00425663
Stabilization of Penicillin G Acylase from Escherichia coli: Site-Directed Mutagenesis of the Protein Surface to Increase Multipoint Covalent Attachment
10.1128/AEM.70.2.1249-1251.2004
One-step purification, covalent immobilization, and additional stabilization of a thermophilic poly-his-tagged β-galactosidase from Thermus sp. strain T2 by using novel heterofunctional chelate - Epoxy sepabeads
10.1021/bm020086j
The immobilization of a thermophilic β-galactosidase on Sepabeads supports decreases product inhibition: Complete hydrolysis of lactose in dairy products
10.1016/S0141-0229(03)00120-0
Coinoculation with hepatitis B surface and core antigen promotes a Th1 immune response to a multiepitopic protein of HIV-1
10.1111/j.1440-1711.2005.01408.x
Penicillin G acylase from Kluyvera citrophila new choice as industrial enzyme
10.1007/BF01022325
Structural organization of the major autolysin from Streptococcus pneumoniae
10.1074/jbc.271.12.6832
A preliminary crystallographic study of recombinant NicX, an Fe 2+-dependent 2,5-dihydroxypyridine dioxygenase from Pseudomonas putida KT2440
10.1107/S174430911001119X
Molecular characterization of the safracin biosynthetic pathway from Pseudomonas fluorescens A2-2: Designing new cytotoxic compounds
10.1111/j.1365-2958.2004.04433.x
Construction of a broad-host-range pneumococcal promoter-probe plasmid
10.1016/0378-1119(90)90455-Z
Taking aim on bacterial pathogens: from phage therapy to enzybiotics
10.1016/j.mib.2007.08.002
Functionalization of gold surfaces for specific and reversible attachment of a fused β-galactosidase and choline-receptor protein
10.1021/ja963465r
Disposable amperometric magnetoimmunosensors for the specific detection of Streptococcus pneumoniae
10.1016/j.bios.2010.06.011
Genome of the psychrophilic bacterium Bacillus psychrosaccharolyticus, a potential source of 2'-deoxyribosyltransferase for industrial nucleoside synthesis
10.1128/genomeA.00309-13
Controlled autolysis facilitates the polyhydroxyalkanoate recovery in Pseudomonas putida KT2440
10.1111/j.1751-7915.2011.00257.x
Molecular peculiarities of the lytA gene isolated from clinical pneumococcal strains that are bile insoluble
10.1128/JCM.40.7.2545-2554.2002
Contruction of a chimeric thermostable pyrophosphatase to facilitate its purification and immobilization by using the choline-binding tag
10.1128/AEM.70.8.4642-4647.2004
New insights into the BzdR-mediated transcriptional regulation of the anaerobic catabolism of benzoate in Azoarcus sp. CIB
10.1099/mic.0.2007/011361-0
Pipelines for New Chemicals: A strategy to create new value chains and stimulate innovation-based economic revival in Southern European countries
10.1111/1462-2920.12337
Structural requirements of choline derivatives for 'conversion' of pneumococcal amidase A new single-step procedure for purification of this autolysin
10.1016/0014-5793(88)80759-2
One-step purification, covalent immobilization, and additional stabilization of poly-his-tagged proteins using novel heterofunctional chelate-epoxy supports
10.1002/bit.10019
The role of cofactor binding in tryptophan accessibility and conformational stability of His-tagged d-amino acid oxidase from Trigonopsis variabilis
10.1016/j.bbapap.2007.03.009
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
10.1186/s13059-016-0883-6
Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae
10.1128/JB.185.7.2362-2368.2003
Reply to Behrman: "N-Formylmaleamic acid: An intermediate in nicotinic acid metabolism"
10.1073/pnas.0809517105
Transcriptional regulation of the divergent paa catabolic operons for phenylacetic acid degradation in Escherichia coli
10.1074/jbc.275.16.12214
Oxygen-dependent regulation of the central pathway for the anaerobic catabolism of aromatic compounds in Azoarcus sp. strain CIB
10.1128/JB.188.7.2343-2354.2006
Unravelling the pleiotropic role of the MceG ATPase in Mycobacterium smegmatis
10.1111/1462-2920.13771
Aromatic metabolism versus carbon availability: The regulatory network that controls catabolism of less-preferred carbon sources in Escherichia coli
10.1016/j.femsre.2004.04.004
NMR investigations of protein-carbohydrate interactions. Binding studies and refined three-dimensional solution structure of the complex between the B domain of wheat germ agglutinin and N, N', N''-triacetylchitotriose
10.1046/j.1432-1327.2000.01415.x
Genetic characterization of the styrene lower catabolic pathway of Pseudomonas sp. strain Y2
10.1016/S0378-1119(03)00794-7
The impact of R53C mutation on the three-dimensional structure, stability, and DNA-binding properties of the human Hesx-1 homeodomain
10.1002/1439-7633(20020802)3:8<726::AID-CBIC726>3.0.CO;2-C
Engineering the D-amino acid oxidase from Trigonopsis variabilis to facilitate its overproduction in Escherichia coli and its downstream processing by tailor-made metal chelate supports
10.1016/S0141-0229(99)00019-8
Identification and analysis of a glutaryl-CoA dehydrogenase-encoding gene and its cognate transcriptional regulator from Azoarcus sp. CIB
10.1111/j.1462-2920.2007.01468.x
LytB, a novel pneumococcal murein hydrolase essential for cell separation [1]
10.1046/j.1365-2958.1999.01238.x
Cloning, expression, and characterization of a peculiar choline-binding β-galactosidase from Streptococcus mitis
10.1128/AEM.00618-09
Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440
10.1073/pnas.0802273105
Immobilization and single‐step purification of fusion proteins using DEAE‐cellulose
10.1111/j.1432-1033.1992.tb19840.x
Regulation of the mhp cluster responsible for 3-(3-hydroxyphenyl)propionic acid degradation in Escherichia coli
10.1074/jbc.M303245200
New challenges for syngas fermentation: Towards production of biopolymers
10.1002/jctb.4721
Clinical evaluation of a disposable amperometric magneto-genosensor for the detectcny and identification of Streptococcus pneumoniae
10.1016/j.mimet.2014.04.014
Crystallization of the pneumococcal autolysin LytC: In-house phasing using novel lanthanide complexes
10.1107/S1744309110006081
Characterization of genetic transformation in Streptococcus oralis NCTC 11427: Expression of the pneumococcal amidase in S. oralis using a new shuttle vector
10.1007/BF00331302
Characterization of the transcription unit encoding the major pneumococcal autolysin
10.1016/0378-1119(90)90454-Y
Biodegradation of aromatic compounds by Escherichia coli
10.1128/MMBR.65.4.523-569.2001
Allelic variation of polymorphic locus lytB, encoding a choline-binding protein, from streptococci of the mitis group
10.1128/AEM.71.12.8706-8713.2005
Isolation, characterization and physiological properties of an autolytic-deficient mutant of Streptococcus pneumoniae
10.1007/BF00425504
Functional analysis of the small component of the 4-hydroxyphenylacetate 3-monooxygenase of Escherichia coli W: A prototype of a new flavin:NAD(P)H reductase subfamily
10.1128/JB.182.3.627-636.2000
Biocatalysis for Industrial Production of Active Pharmaceutical Ingredients (APIs)
10.1016/B978-0-12-803725-6.00017-0
Anaerobic catabolism of aromatic compounds: A genetic and genomic view
10.1128/MMBR.00021-08
Identification and biochemical evidence of a medium-chain-length polyhydroxyalkanoate depolymerase in the Bdellovibrio bacteriovorus predatory hydrolytic Arsenal
10.1128/AEM.01099-12
A gene containment strategy based on a restriction-modification system
10.1046/j.1462-2920.2000.00138.x
Pneumococcal phosphorylcholine esterase, Pce, contains a metal binuclear center that is essential for substrate binding and catalysis
10.1110/ps.051575005
3-hydroxyphenylpropionate and phenylpropionate are synergistic activators of the MhpR transcriptional regulator from Escherichia coli
10.1074/jbc.M109.008243
Secretion of mature human interferon alpha 2 into the periplasmic space of Escherichia coli
10.1016/0168-1656(86)90036-2
Cloning and expression of gene fragments encoding the choline-binding domain of pneumococcal murein hydrolases
10.1016/0378-1119(90)90207-8
PHACOS, a functionalized bacterial polyester with bactericidal activity against methicillin-resistant Staphylococcus aureus
10.1016/j.biomaterials.2013.09.059
Characterization of the KstR-dependent promoter of the gene for the first step of the cholesterol degradative pathway in Mycobacterium smegmatis
10.1099/mic.0.049213-0
Crystallization and preliminary X-ray diffraction analysis of proline iminopeptidase from Xanthomonas campestris pv. citri
10.1016/S0014-5793(96)01363-4
Structural studies of the lysozyme coded by the pneumococcal phage Cp‐1: Conformational changes induced by choline
10.1111/j.1432-1033.1990.tb15319.x
Analysis of the catalytic domain of the lysin of the lactococcal bacteriophage Tuc2009 by chimeric gene assembling
10.1016/0378-1097(96)00151-6
Structural basis for selective recognition of pneumococcal cell wall by modular endolysin from phage Cp-1
10.1016/j.str.2003.09.005
Molecular characterization of PcpA: A novel choline-binding protein of Streptococcus pneumoniae
10.1016/S0378-1097(98)00206-7
Overproduction of Thermus sp. strain T2 β-galactosidase in Escherichia coli and preparation by using tailor-made metal chelate supports
10.1128/AEM.69.4.1967-1972.2003
Studies on the activity and the stability of β-galactosidases from Thermus sp strain T2 and from Kluyveromyces fragilis
10.1016/S0141-0229(01)00506-3
Stabilization of heterodimeric enzyme by multipoint covalent immobilization: Penicillin G acylase from Kluyvera citrophila
10.1002/bit.260420408
3'-End modifications of the Streptococcus pneumoniae lytA gene: role of the carboxy terminus of the pneumococcal autolysin in the process of enzymatic activation (conversion)
10.1016/0378-1119(87)90360-X
Bacterial degradation of benzoate: Cross-regulation between aerobic and anaerobic pathways
10.1074/jbc.M111.309005
Identification of a novel positive regulator of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli
10.1006/bbrc.1997.6368
Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): A fish adapted to demersal life
10.1093/dnares/dsw007
Genome sequence of Pseudomonas azelaica HBP1, which catabolizes 2-hydroxybiphenyl fungicide
10.1128/genomeA.e01248-13
Cloning of the authentic bovine gene encoding pepsinogen A and its expression in microbial cells
10.1128/AEM.70.5.2588-2595.2004
Microbial synthesis of poly(β-hydroxyalkanoates) bearing phenyl groups from Pseudomonas putida: Chemical structure and characterization
10.1021/bm010018h
Cloning, expression and immobilization of glutamate racemase from Lactobacillus fermenti for the production of D-glutamate from L-glutamate
10.1023/A:1005335315071
Design of catabolic cassettes for styrene biodegradation
10.1023/A:1024432929423
Catabolism and biotechnological applications of cholesterol degrading bacteria
10.1111/j.1751-7915.2012.00331.x
Oil fractions from the pyrolysis of diverse organic wastes: The different effects of conventional and microwave induced pyrolysis
10.1016/j.jaap.2015.06.006
Cloning in Escherichia coli and molecular analysis of the sucrose system of the Salmonella plasmid SCR-53
10.1007/BF00331358
The subunit I of the respiratory-chain NADH dehydrogenase from Cephalosporium acremonium: the evolution of a mitochondrial gene
10.1007/BF00418525
The homogentisate pathway: A central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida
10.1128/JB.186.15.5062-5077.2004
Stabilization of a Multimeric β-Galactosidase from Thermus sp. Strain T2 by Immobilization on Novel Heterofunctional Epoxy Supports Plus Aldehyde-Dextran Cross-Linking
10.1021/bp034183f
Enhancing desulphurization by engineering a flavin reductase-encoding gene cassette in recombinant biocatalysts
10.1046/j.1462-2920.2000.00151.x
Sequence of the lye gene encoding the autolytic lysozyme of Clostridium acetobutylicum ATCC824: comparison with other lytic enzymes
10.1016/0378-1119(91)90460-S
The turnover of medium-chain-length polyhydroxyalkanoates in Pseudomonas putida KT2442 and the fundamental role of PhaZ depolymerase for the metabolic balance
10.1111/j.1462-2920.2009.02061.x
Genome sequence of the methanotrophic poly-β-hydroxybutyrate producer Methylocystis parvus OBBP
10.1128/JB.01346-12
Conformational stability of the penicillin G acylase from Kluyvera citrophila
10.1007/BF00694302
Searching for autolysin functions: Characterization of a pneumococcal mutant deleted in the lytA gene
10.1111/j.1432-1033.1986.tb09749.x
Engineering alternative isobutanol production platforms
10.1186/s13568-015-0119-2
Initial step in the catabolism of cholesterol by Mycobacterium smegmatis mc2155
10.1111/j.1462-2920.2010.02398.x
Identification of a Missing Link in the Evolution of an Enzyme into a Transcriptional Regulator
10.1371/journal.pone.0057518
An improved method to clone penicillin acylase genes: Cloning and expression in Escherichia coli of penicillin G acylase from Kluyvera citrophila
10.1016/0168-1656(86)90001-5
Draft genome sequence of Actinoplanes utahensis NRRL 12052, a microorganism involved in industrial production of pharmaceutical intermediates
10.1128/genomeA.01411-14
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
10.1038/nature04332
Erratum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus (Nature (2005) 438 (1151-1156))
10.1038/nature04572
The molecular characterization of the first autolytic lysozyme of Streptococcus pneumoniae reveals evolutionary mobile domains
10.1046/j.1365-2958.1999.01455.x
Engineering Mycobacterium smegmatis for testosterone production
10.1111/1751-7915.12433
The role of FIS protein in the physiological control of the expression of the Escherichia coli meta-hpa operon
10.1099/mic.0.2007/015578-0
The PhaD regulator controls the simultaneous expression of the pha genes involved in polyhydroxyalkanoate metabolism and turnover in Pseudomonas putida KT2442
10.1111/j.1462-2920.2010.02199.x
Genome sequence of Pseudomonas azelaica strain Aramco J
10.1128/genomeA.00037-15
Analysis of dibenzothiophene desulfurization in a recombinant pseudomonas putida strain
10.1128/AEM.01682-08
Genetic characterization of the phenylacetyl-coenzyme A oxygenase from the aerobic phenylacetic acid degradation pathway of Escherichia coli
10.1128/AEM.01550-06
Development of amperometric magnetogenosensors coupled to asymmetric PCR for the specific detection of Streptococcus pneumoniae
10.1007/s00216-010-4645-0
Coregulation by phenylacetyl-coenzyme A-responsive PaaX integrates control of the upper and lower pathways for catabolism of styrene by Pseudomonas sp. strain Y2
10.1128/JB.00176-06
Nucleotide sequence and expression of the pneumococcal autolysin gene from its own promoter in Escherichia coli
10.1016/0378-1119(86)90215-5
Genetic modification of the penicillin G acylase surface to improve its reversible immobilization on ionic exchangers
10.1128/AEM.02107-06
VO1, a temperate bacteriophage of the type 19A multiresistant epidemic 8249 strain of Streptococcus pneumoniae: Analysis of variability of lytic and putative C5 methyltransferase genes
10.1089/107662903764736292
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
10.1186/s13059-016-1090-1
Purification and characterization of the autolytic glycosidase of streptococcus pneumoniae
10.1016/S0006-291X(89)80205-0
The phenylacetyl-CoA catabolon: A complex catabolic unit with broad biotechnological applications
10.1046/j.1365-2958.2001.02344.x
Genome sequence of the olive tree, Olea europaea
10.1186/s13742-016-0134-5
Mycobacterium smegmatis is a suitable cell factory for the production of steroidic synthons
10.1111/1751-7915.12429
Genome sequence of Streptomyces exfoliatus DSMZ 41693, a source of poly(3-hydroxyalkanoate)-degrading enzymes
10.1128/genomeA.e01272-13
Promotion of multipoint covalent immobilization through different regions of genetically modified penicillin G acylase from E. coli
10.1016/j.procbio.2009.10.013
New insights on the specificity of penicillin acylase
10.1006/bbrc.1995.1089
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440
10.1046/j.1462-2920.2002.00370.x
The PaaX Repressor, a Link between Penicillin G Acylase and the Phenylacetyl-Coenzyme A Catabolon of Escherichia coli W
10.1128/JB.186.7.2215-2220.2004
The structure of the C-C bond hydrolase MhpC provides insights into its catalytic mechanism
10.1016/j.jmb.2004.11.033
Molecular characterization of a family of choline-binding proteins of Clostridium beijerinckii NCIB 8052. Evolution and gene redundancy in prokaryotic cell
10.1016/S0378-1119(96)00390-3
Improved stabilization of genetically modified penicillin G acylase in the presence of organic cosolvents by co-immobilization of the enzyme with polyethyleneimine
10.1002/adsc.200600313
Cholesterol metabolism in Mycobacterium smegmatis
10.1111/j.1758-2229.2011.00314.x
Molecular characterization of a new gene cluster for steroid degradation in Mycobacterium smegmatis
10.1111/1462-2920.13704
Syngas obtained by microwave pyrolysis of household wastes as feedstock for polyhydroxyalkanoate production in Rhodospirillum rubrum
10.1111/1751-7915.12411
Inactivation Mechanisms of His-Tagged D-Amino Acid Oxidase from Trigonopsis variabilis
10.1002/9783527611904.ch38
Selection of Ceratitis capitata (Diptera: Tephritidae) Specific Recombinant Monoclonal Phage Display Antibodies for Prey Detection Analysis
10.1371/journal.pone.0051440
Comparative analysis of the physiological and structural properties of a medium chain length polyhydroxyalkanoate depolymerase from Pseudomonas putida KT2442
10.1002/elsc.200700057
Genome sequence of the butanol hyperproducer Clostridium saccharoperbutylacetonicum N1-4
10.1128/genomeA.00071-13
Structural and thermodynamic characterization of Pal, a phage natural chimeric lysin active against pneumococci
10.1074/jbc.M407067200
Complete nucleotide sequence of the penicillin acylase gene from Kluyvera citrophila
10.1016/0378-1119(86)90386-0
Do sequence repeats play an equivalent role in the choline-binding module of pneumococcal LytA amidase?
10.1074/jbc.M004379200
BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp. CIB, is the first member of a new subfamily of transcriptional regulators
10.1074/jbc.M412259200
Reversible immobilization of a thermophilic β-galactosidase via ionic adsorption on PEI-coated Sepabeads
10.1016/S0141-0229(02)00307-1
Reward for Bdellovibrio bacteriovorus for preying on a polyhydroxyalkanoate producer
10.1111/1462-2920.12047
Characterization of the KstR2 regulator responsible of the lower cholesterol degradative pathway in Mycobacterium smegmatis
10.1111/1758-2229.12255
Overproduction and purification of biologically active native fungal α-sarcin in Escherichia coli
10.1016/0378-1119(94)90370-0
Biotransformations catalyzed by multimeric enzymes: Stabilization of tetrameric ampicillin acylase permits the optimization of ampicillin synthesis under dissociation conditions
10.1021/bm000072i
Conformational selection of glycomimetics at enzyme catalytic sites: Experimental demonstration of the binding of distinct high-energy distorted conformations of C-, S-, and O-glycosides by E. Coli β-galactosidases
10.1021/ja0122445
The polyhydroxyalkanoate metabolism controls carbon and energy spillage in Pseudomonas putida
10.1111/j.1462-2920.2011.02684.x
Characterization of Ejl, the cell-wall amidase coded by the pneumococcal bacteriophage Ej-1
10.1110/ps.4680102
Molecular and biochemical analysis of the system regulating the lytic/lysogenic cycle in the pneumococcal temperate phage MM1
10.1016/S0378-1097(03)00281-7
cAMP-dependent protein kinases from the insect Ceratitis capitata
10.1016/0003-9861(83)90442-3
Teichoic acid choline esterase, a novel hydrolytic activity in Streptococcus oralis.
10.1016/0378-1097(91)90611-d
Structural analysis and biological significance of the cell wall lytic enzymes of Streptococcus pneumoniae and its bacteriophage.
10.1111/j.1574-6968.1992.tb05737.x
Role of the C-terminal domain of the lysozyme of Clostridium acetobutylicum ATCC 824 in a chimeric pneumococcal-clostridial cell wall lytic enzyme.
10.1016/0014-5793(93)81621-6
The lytic enzyme of the pneumococcal phage Dp-1: a chimeric lysin of intergeneric origin.
10.1046/j.1365-2958.1997.5101880.x
Identification of the pac promoter from Kluyvera citrophila.
10.1016/s0378-1097(97)00117-1
Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12.
10.1128/jb.179.8.2573-2581.1997
Identification and characterization of IS1381, a new insertion sequence in Streptococcus pneumoniae.
10.1128/jb.179.7.2459-2463.1997
The pneumococcal cell wall degrading enzymes: a modular design to create new lysins?
10.1089/mdr.1997.3.199
Proline iminopeptidase gene from Xanthomonas campestris pv. citri.
10.1099/13500872-142-10-2951
Activation of adenylate cyclase activity in Ceratitis capitata at a brain membranes by cations and anions
10.1016/0306-4492(81)90003-4
Regulation of adenylate cyclase from brain membranes of the insect Ceratitis capitata
10.1016/0305-0491(81)90123-1
Phosphoprotein phosphatase activity during development of the insect Ceratitis capitata
10.1016/0006-291X(79)91849-7
Thermal stability of the membrane-bound adenylate cyclase from Ceratitis capitata brain
10.1016/0305-0491(82)90169-9
A natural non-protein low molecular weight cAMP-dependent protein kinase inhibitor from the insect Ceratitis capitata. Isolation and preliminary characterization
10.1016/0020-1790(87)90076-X
Cyclic nucleotide independent protein kinases from Ceratitis capitata pharate adults
10.1016/0305-0491(84)90260-8
Effect of proteolytic and lipolytic enzymes on the adenylate cyclase activity from brain membranes of Ceratitis capitata
10.1016/0305-0491(82)90313-3
Cyclic nucleotide-dependent protein kinases and cAMP-binding protein from Ceratitis capitata brain
10.1016/0305-0491(82)90060-8
Regulatory properties of adenylate cyclase preparations of pharate adult from the insect Ceratitis capitata
10.1016/0305-0491(85)90268-8
Cyclic AMP-dependent protein kinases in synaptosomal fractions from Ceratitis capitata heads
10.1016/0305-0491(87)90300-2
Purification and properties of a cGMP-dependent protein kinase from Ceratitis capitata pharate adults
10.1016/0305-0491(83)90204-3
Unravelling a new catabolic pathway of C-19 steroids in Mycobacterium smegmatis
10.1111/1462-2920.14114
Quantifying dynamic mechanisms of auto-regulation in Escherichia coli with synthetic promoter in response to varying external phosphate levels
10.1038/s41598-018-38223-w
Molecular and functional analysis of the mce4 operon in Mycobacterium smegmatis
10.1111/1462-2920.13869
Engineering the L-arabinose isomerase from Enterococcus faecium for D-tagatose synthesis
10.3390/molecules22122164
The urgent need for microbiology literacy in society
10.1111/1462-2920.14611
Production of 4-ene-3-ketosteroids in corynebacterium glutamicum
10.3390/catal7110316
Metabolic and process engineering for biodesulfurization in Gram-negative bacteria
10.1016/j.jbiotec.2017.09.004
Effect of Arthrospira supplementation on Oreochromis niloticus gut microbiota and flesh quality
10.1111/are.14020
Effect of spirulina (Arthrospira platensis) supplementation on tilapia (oreochromis niloticus) growth and stress responsiveness under hypoxia
10.5424/sjar/2018161-11698
Identification and expression of the 11β-steroid hydroxylase from Cochliobolus lunatus in Corynebacterium glutamicum
10.1111/1751-7915.13428
Plasmids as tools for containment
10.1128/microbiolspec.PLAS-0011-2013
Synthesis of a mesoporous carbon from peach stones for adsorption of basic dyes from wastewater: kinetics, modeling, and thermodynamic studies
10.1007/s10098-016-1098-y
One-Step Immobilization and Stabilization of a Recombinant Enterococcus faecium DBFIQ E36 l-Arabinose Isomerase for d-Tagatose Synthesis
10.1007/s12010-018-2905-1
FLYCOP: Metabolic modeling-based analysis and engineering microbial communities
10.1093/bioinformatics/bty561
Influence of aluminum-based adjuvant on the immune response to multiantigenic formulation
10.1089/vim.2006.19.712
New insights on steroid biotechnology
10.3389/fmicb.2018.00958
Bioconversion of phytosterols into androstadienedione by Mycobacterium smegmatis CECT 8331
10.1007/978-1-4939-7183-1_15
Microalgae, old sustainable food and fashion nutraceuticals
10.1111/1751-7915.12800
Engineering a bzd cassette for the anaerobic bioconversion of aromatic compounds
10.1111/1751-7915.12746
Identification of trans ‐AT polyketide clusters in two marine bacteria reveals cryptic similarities between distinct symbiosis factors
10.1111/1462-2920.15470
Eduardo Diaz
Diaz Eduardo
ORCID: 0000-0002-9731-6524
Biochemical characterization of the transcriptional regulator BzdR from Azoarcus sp. CIB
10.1074/jbc.M110.143503
Molecular characterization of the gallate dioxygenase from Pseudomonas putida KT2440: The prototype of a new subgroup of extradiol dioxygenases
10.1074/jbc.M502585200
Functional analysis of the small component of the 4-hydroxyphenylacetate 3-monooxygenase of Escherichia coli W: A prototype of a new flavin:NAD(P)H reductase subfamily
10.1128/JB.182.3.627-636.2000
Engineering synthetic bacterial consortia for enhanced desulfurization and revalorization of oil sulfur compounds
10.1016/j.ymben.2016.01.005
Antifungal monoterpene production in elicited cell suspension cultures of Piqueria trinervia
10.1016/S0031-9422(00)00211-9
Catabolism of phenylacetic acid in Escherichia coli: Characterization of a new aerobic hybrid pathway
10.1074/jbc.273.40.25974
Anaerobic catabolism of aromatic compounds: A genetic and genomic view
10.1128/MMBR.00021-08
Bacterial promoters triggering biodegradation of aromatic pollutants
10.1016/S0958-1669(00)00126-9
A gene containment strategy based on a restriction-modification system
10.1046/j.1462-2920.2000.00138.x
Molecular characterization of PadA, a phenylacetaldehyde dehydrogenase from Escherichia coli
10.1016/S0014-5793(97)00228-7
Iron-reducing bacteria unravel novel strategies for the anaerobic catabolism of aromatic compounds
10.1111/j.1365-2958.2005.04937.x
Characterization of the last step of the aerobic phenylacetic acid degradation pathway
10.1099/mic.0.2006/002444-0
Analysis of dibenzothiophene desulfurization in a recombinant pseudomonas putida strain
10.1128/AEM.01682-08
The evolutionary relationship of biphenyl dioxygenase from Gram-positive Rhodococcus globerulus P6 to multicomponent dioxygenases from Gram-negative bacteria
10.1016/0378-1119(94)00530-6
3-hydroxyphenylpropionate and phenylpropionate are synergistic activators of the MhpR transcriptional regulator from Escherichia coli
10.1074/jbc.M109.008243
AccR Is a Master Regulator Involved in Carbon Catabolite Repression of the Anaerobic Catabolism of Aromatic Compounds in Azoarcus sp CIB
10.1074/jbc.M113.517714
Refactoring the λ phage lytic/lysogenic decision with a synthetic regulator
10.1002/mbo3.352
Genetic characterization of the phenylacetyl-coenzyme A oxygenase from the aerobic phenylacetic acid degradation pathway of Escherichia coli
10.1128/AEM.01550-06
The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp strain CIB
10.1128/JB.186.17.5762-5774.2004
Aerobic degradation of aromatic compounds
10.1016/j.copbio.2012.10.010
Identification of the Geobacter metallireducens BamVW Two-Component System, Involved in Transcriptional Regulation of Aromatic Degradation
10.1128/AEM.02255-09
Coregulation by phenylacetyl-coenzyme A-responsive PaaX integrates control of the upper and lower pathways for catabolism of styrene by Pseudomonas sp strain Y2
10.1128/JB.00176-06
Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: The phenylacetyl-CoA catabolon
10.1073/pnas.95.11.6419
Characterization of the mbd cluster encoding the anaerobic 3-methylbenzoyl-CoA central pathway
10.1111/j.1462-2920.2012.02818.x
Unravelling the gallic acid degradation pathway in bacteria: The gal cluster from Pseudomonas putida
10.1111/j.1365-2958.2010.07448.x
A preliminary crystallographic study of recombinant NicX, an Fe 2+-dependent 2,5-dihydroxypyridine dioxygenase from Pseudomonas putida KT2440
10.1107/S174430911001119X
Insights on the regulation of the phenylacetate degradation pathway from Escherichia coli
10.1111/1758-2229.12117
Bacterial Degradation of Benzoate CROSS-REGULATION BETWEEN AEROBIC AND ANAEROBIC PATHWAYS
10.1074/jbc.M111.309005
Construction of a broad-host-range pneumococcal promoter-probe plasmid
10.1016/0378-1119(90)90455-Z
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440
10.1046/j.1462-2920.2002.00370.x
Restricting the dispersal of recombinant DNA: Design of a contained biological catalyst
10.1038/nbt0296-189
Liver retinol transporter and receptor for serum retinol-binding protein (RBP4)
10.1074/jbc.M112.369132
A finely tuned regulatory circuit of the nicotinic acid degradation pathway in Pseudomonas putida
10.1111/j.1462-2920.2011.02471.x
Azoarcus sp CIB, an Anaerobic Biodegrader of Aromatic Compounds Shows an Endophytic Lifestyle
10.1371/journal.pone.0110771
Whole-genome analysis of Azoarcus sp strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features
10.1016/j.syapm.2015.07.002
New insights into the BzdR-mediated transcriptional regulation of the anaerobic catabolism of benzoate in Azoarcus sp CIB
10.1099/mic.0.2007/011361-0
Design of catabolic cassettes for styrene biodegradation
10.1023/A:1024432929423
Transcriptional regulation of the divergent paa catabolic operons for phenylacetic acid degradation in Escherichia coli
10.1074/jbc.275.16.12214
Reply to Behrman: "N-Formylmaleamic acid: An intermediate in nicotinic acid metabolism"
10.1073/pnas.0809517105
Plasmids as tools for containment
10.1128/microbiolspec.PLAS-0011-2013
BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp CIB, is the first member of a new subfamily of transcriptional regulators
10.1074/jbc.M412259200
Oxygen-dependent regulation of the central pathway for the anaerobic catabolism of aromatic compounds in Azoarcus sp strain CIB
10.1128/JB.188.7.2343-2354.2006
Aromatic metabolism versus carbon availability: The regulatory network that controls catabolism of less-preferred carbon sources in Escherichia coli
10.1016/j.femsre.2004.04.004
The homogentisate pathway: A central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida
10.1128/JB.186.15.5062-5077.2004
Genetic characterization of the styrene lower catabolic pathway of Pseudomonas sp strain Y2
10.1016/S0378-1119(03)00794-7
Enhancing desulphurization by engineering a flavin reductase-encoding gene cassette in recombinant biocatalysts
10.1046/j.1462-2920.2000.00151.x
A second chromosomal copy of the catA gene endows Pseudomonas putida mt-2 with an enzymatic safety valve for excess of catechol
10.1111/1462-2920.12361
Identification and analysis of a glutaryl-CoA dehydrogenase-encoding gene and its cognate transcriptional regulator from Azoarcus sp CIB
10.1111/j.1462-2920.2007.01468.x
The structure of new cis and trans 3′-phenyl-3′,3a′, 4′,5′,6′,7a′-hexahydro-2,1-benzisoxazole-7a′- spiro-2-(3-phenylaziridine)
10.1002/jhet.5570300117
Deciphering the genetic determinants for aerobic nicotinic acid degradation: The nic cluster from Pseudomonas putida KT2440
10.1073/pnas.0802273105
Regulation of the mhp cluster responsible for 3-(3-hydroxyphenyl)propionic acid degradation in Escherichia coli
10.1074/jbc.M303245200
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
10.1111/j.1462-2920.2005.00890.x
New challenges for syngas fermentation: Towards production of biopolymers
10.1002/jctb.4721
Identification of a Missing Link in the Evolution of an Enzyme into a Transcriptional Regulator
10.1371/journal.pone.0057518
Characterization of the transcription unit encoding the major pneumococcal autolysin
10.1016/0378-1119(90)90454-Y
Biodegradation of aromatic compounds by Escherichia coli
10.1128/MMBR.65.4.523-569.2001
Genome Sequence of Pseudomonas azelaica Strain Aramco J.
10.1128/genomeA.00037-15
Unraveling the Specific Regulation of the Central Pathway for Anaerobic Degradation of 3-Methylbenzoate
10.1074/jbc.M115.637074
Genome Sequence of Pseudomonas azelaica HBP1, Which Catabolizes 2-Hydroxybiphenyl Fungicide.
10.1128/genomeA.01248-13
Genome mining in Azoarcus spp. CIB: a model bacterium to engineer biocatalysts for anaerobic removal of aromatic compounds
10.1016/j.nbt.2009.06.685
Genetic clues on the evolution of anaerobic catabolism of aromatic compounds
10.1099/mic.0.27186-0
Expanding the current knowledge and biotechnological applications of the oxygen‐independent ortho ‐phthalate degradation pathway
10.1111/1462-2920.15119
Elevated c‐di‐GMP levels promote biofilm formation and biodesulfurization capacity of Rhodococcus erythropolis
10.1111/1751-7915.13689
Manuel Carmona
Carmona Manuel
ORCID: 0000-0002-1591-7618
Refactoring the λ phage lytic/lysogenic decision with a synthetic regulator.
10.1002/mbo3.352
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Unraveling the specific regulation of the central pathway for anaerobic degradation of 3-methylbenzoate.
10.1074/jbc.M115.637074
Azoarcus sp. CIB, an anaerobic biodegrader of aromatic compounds shows an endophytic lifestyle.
10.1371/journal.pone.0110771
AccR is a master regulator involved in carbon catabolite repression of the anaerobic catabolism of aromatic compounds in Azoarcus sp. CIB.
10.1074/jbc.M113.517714
Identification of a missing link in the evolution of an enzyme into a transcriptional regulator.
10.1371/journal.pone.0057518
Characterization of the mbd cluster encoding the anaerobic 3-methylbenzoyl-CoA central pathway.
10.1111/j.1462-2920.2012.02818.x
Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways.
10.1074/jbc.M111.309005
Biochemical characterization of the transcriptional regulator BzdR from Azoarcus sp. CIB.
10.1074/jbc.M110.143503
Identification of the Geobacter metallireducens bamVW two-component system, involved in transcriptional regulation of aromatic degradation.
10.1128/AEM.02255-09
Anaerobic catabolism of aromatic compounds: a genetic and genomic view.
10.1128/MMBR.00021-08
Identification and analysis of a glutaryl-CoA dehydrogenase-encoding gene and its cognate transcriptional regulator from Azoarcus sp. CIB.
10.1111/j.1462-2920.2007.01468.x
Oxygen-dependent regulation of the central pathway for the anaerobic catabolism of aromatic compounds in Azoarcus sp. strain CIB.
10.1128/JB.188.7.2343-2354.2006
Iron-reducing bacteria unravel novel strategies for the anaerobic catabolism of aromatic compounds.
10.1111/j.1365-2958.2005.04937.x
BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp. CIB, is the first member of a new subfamily of transcriptional regulators.
10.1074/jbc.M412259200
m-xylene-responsive Pu-PnifH hybrid sigma54 promoters that overcome physiological control in Pseudomonas putida KT2442.
10.1128/JB.187.1.125-134.2005
The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB.
10.1128/JB.186.17.5762-5774.2004
Genetic clues on the evolution of anaerobic catabolism of aromatic compounds.
10.1099/mic.0.27186-0
In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida.
10.1128/JB.182.17.4711-4718.2000
Recruitment of RNA polymerase is a rate-limiting step for the activation of the sigma(54) promoter Pu of Pseudomonas putida.
10.1074/jbc.274.47.33790
Involvement of the FtsH (HflB) protease in the activity of sigma 54 promoters.
10.1046/j.1365-2958.1999.01169.x
DNA bending and the initiation of transcription at sigma54-dependent bacterial promoters.
10.1073/pnas.94.18.9568
Activation of transcription at sigma 54-dependent promoters on linear templates requires intrinsic or induced bending of the DNA.
10.1006/jmbi.1996.0468
Escherichia coli hha mutants, DNA supercoiling and expression of the haemolysin genes from the recombinant plasmid pANN202-312.
10.1111/j.1365-2958.1993.tb01230.x
The Hha protein from Escherichia coli is highly homologous to the YmoA protein from Yersinia enterocolitica.
10.1111/j.1365-2958.1992.tb02214.x
The hha gene modulates haemolysin expression in Escherichia coli.
10.1111/j.1365-2958.1991.tb01902.x
New insights into the BzdR-mediated transcriptional regulation of the anaerobic catabolism of benzoate in Azoarcus sp. CIB.
10.1099/mic.0.2007/011361-0
Speeding up bioproduction of selenium nanoparticles by using Vibrio natriegens as microbial factory
10.1038/s41598-017-16252-1
ArxA From Azoarcus sp. CIB, an Anaerobic Arsenite Oxidase From an Obligate Heterotrophic and Mesophilic Bacterium
10.3389/fmicb.2019.01699
Further Insights into the Architecture of the PN Promoter That Controls the Expression of the bzd Genes in Azoarcus
10.3390/genes10070489
Enhancing the Rice Seedlings Growth Promotion Abilities of Azoarcus sp. CIB by Heterologous Expression of ACC Deaminase to Improve Performance of Plants Exposed to Cadmium Stress
10.3390/microorganisms8091453
Comparative Genomics Provides Insights into the Taxonomy of Azoarcus and Reveals Separate Origins of Nif Genes in the Proposed Azoarcus and Aromatoleum Genera
10.3390/genes12010071
Motility, Adhesion and c-di-GMP Influence the Endophytic Colonization of Rice by Azoarcus sp. CIB
10.3390/microorganisms9030554
Aida Arcas
Arcas Aida
ORCID: 0000-0001-9182-0810
The Evolutionary History of Ephs and Ephrins: Toward Multicellular Organisms
10.1093/molbev/msz222
A gene regulatory network to control EMT programs in development and disease
10.1038/s41467-019-13091-8
DDRprot: a database of DNA damage response-related proteins.
10.1093/database/baw123
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Emergence and evolutionary analysis of the human DDR network: implications in comparative genomics and downstream analyses.
10.1093/molbev/msu046
Serine/threonine kinases and E2-ubiquitin conjugating enzymes in Planctomycetes: unexpected findings.
10.1007/s10482-013-9993-2
Draft genome sequence of the electricigen Acidiphilium sp. strain PM (DSM 24941).
10.1128/JB.05386-11
Environmental transcriptome analysis reveals physiological differences between biofilm and planktonic modes of life of the iron oxidizing bacteria Leptospirillum spp. in their natural microbial community.
10.1186/1471-2164-11-404
Reply to: Zebrafish prrx1a mutants have normal hearts
10.1038/s41586-020-2675-0
Manuel J Gómez
Gómez Manuel J
/ Manuel J Gómez
/ Manuel Gómez
ORCID: 0000-0002-4111-4835
Deep subsurface sulfate reduction and methanogenesis in the Iberian Pyrite Belt revealed through geochemistry and molecular biomarkers
10.1111/gbi.12065
A microbial oasis in the hypersaline atacama subsurface discovered by a life detector chip: Implications for the search for life on mars
10.1089/ast.2011.0654
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome
10.1111/1751-7915.12061
Whole Transcriptome Analysis of Acinetobacter baumannii Assessed by RNA-Sequencing Reveals Different mRNA Expression Profiles in Biofilm Compared to Planktonic Cells
10.1371/journal.pone.0072968
Prokaryotic communities and operating metabolisms in the surface and the permafrost of Deception Island (Antarctica)
10.1111/j.1462-2920.2012.02767.x
Exploring Bacterial Diversity in Hospital Environments by GS-FLX Titanium Pyrosequencing
10.1371/journal.pone.0044105
Comparative genomic analysis reveals novel facts about leptospirillum spp. cytochromes
10.1159/000338105
Draft Genome Sequence of the Electricigen Acidiphilium sp Strain PM (DSM 24941)
10.1128/JB.05386-11
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment
10.1111/j.1462-2920.2011.02492.x
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1
10.1128/JB.01281-10
Partial and complete denitrification in Thermus thermophilus: Lessons from genome drafts
10.1042/BST0390249
Lateral transfer of the denitrification pathway genes among Thermus thermophilus strains
10.1128/AEM.02048-10
Transcriptomics throughout the life cycle of Leishmania infantum: High down-regulation rate in the amastigote stage
10.1016/j.ijpara.2010.05.013
Environmental transcriptome analysis reveals physiological differences between biofilm and planktonic modes of life of the iron oxidizing bacteria Leptospirillum spp. in their natural microbial community
10.1186/1471-2164-11-404
Temperature increase prevails over acidification in gene expression modulation of amastigote differentiation in Leishmania infantum
10.1186/1471-2164-11-31
Genome-wide analysis reveals increased levels of transcripts related with infectivity in peanut lectin non-agglutinated promastigotes of Leishmania infantum
10.1016/j.ygeno.2009.01.007
The environmental fate of organic pollutants through the global microbial metabolism
10.1038/msb4100156
mraW, an essential gene at the dcw cluster of Escherichia coli codes for a cytoplasmic protein with methyltransferase activity
10.1016/S0300-9084(99)00208-4
Regulation of transcription of cell division genes in the Eschericia coli dcw cluster
10.1007/s000180050158
Gene Expression and Regulation
10.1002/9781444311433.ch4
sigA is an essential gene in Mycobacterium smegmatis
10.1046/j.1365-2958.1998.00960.x
Role of the extracytoplasmic-function σ factor σH in Mycobacterium tuberculosis global gene expression
10.1046/j.1365-2958.2002.03005.x
Extra and intracellular expression of Mycobacterium tuberculosis genes
10.1054/tuld.1998.0010
Identification and characterization of two divergently transcribed iron regulated genes in Mycobacterium tuberculosis
10.1054/tuld.1999.0219
The Mycobacterium tuberculosis Sigma Factor B Is Required for Full Response to Cell Envelope Stress and Hypoxia In Vitro, but It Is Dispensable for In Vivo Growth
10.1128/jb.00510-09
Identification of Secreted Proteins of Mycobacterium tuberculosis by a Bioinformatic Approach
10.1128/iai.68.4.2323-2327.2000
Characterization of the Secreted MPT53 Antigen of Mycobacterium tuberculosis
10.1128/iai.69.9.5936-5939.2001
Expression of the Bacillus subtilis spolVB gene is under dual F/ G control
10.1099/13500872-142-12-3453
Identification of a new σB-controlled gene, csbX, in Bacillus subtilis
10.1016/s0378-1119(96)00770-6
Involvement of the NH2- and COOH-Terminal ends of PBP3 of Escherichia coli on β-Lactam Binding, Membrane Localization, and Function of the Protein
10.1007/978-1-4757-9359-8_37
Gene order in Prokaryotes: conservation and implications
10.1007/0-306-48579-6_11
Scoring docking models with evolutionary information
10.1002/prot.20570
Prediction of Functional Sites in Proteins by Evolutionary Methods
10.1007/978-3-662-08722-0_22
The Dynamic Genomes of Acidophiles
10.1007/978-94-007-6488-0_3
Chromosomal replication dynamics and interaction with the sliding clamp determine orientation of bacterial transposable elements
10.1093/gbe/evu052
Hyperglycosylation of glycopeptidolipid of Mycobacterium smegmatis under nutrient starvation: Structural studies
10.1099/mic.0.27908-0
Nickel-resistance determinants in acidiphilium sp. Pm identified by genome-wide functional screening
10.1371/journal.pone.0095041
Large-Scale Genomic Analysis Suggests a Neutral Punctuated Dynamics of Transposable Elements in Bacterial Genomes
10.1371/journal.pcbi.1003680
Accessible protein interaction data for network modeling. Structure of the information and available repositories
10.1007/978-3-540-32126-2_1
Variations in the Metabolism of Peptidoglycan Prior to Polymerization
10.1007/978-1-4757-9359-8_15
Stage-specific differential gene expression in Leishmania infantum: from the foregut of Phlebotomus perniciosus to the human phagocyte
10.1186/1471-2164-15-849
Complete Genome Sequence of the Multiresistant Acinetobacter baumannii Strain AbH12O-A2, Isolated during a Large Outbreak in Spain
10.1128/genomea.01182-14
Telomerase Is Essential for Zebrafish Heart Regeneration.
10.1016/j.celrep.2015.07.064
Transposase interaction with the β sliding clamp: effects on insertion sequence proliferation and transposition rate.
10.1038/srep13329
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
A model for the structure and mechanism of action of pulmonary surfactant protein B.
10.1096/fj.15-273458
Pyrosequencing-Based Assessment of the Microbial Community Structure of Pastoruri Glacier Area (Huascaran National Park, Peru), a Natural Extreme Acidic Environment.
10.1007/s00248-015-0634-3
Transcriptional response to copper excess and identification of genes involved in heavy metal tolerance in the extremophilic microalga Chlamydomonas acidophila.
10.1007/s00792-015-0746-1
JNK-mediated disruption of bile acid homeostasis promotes intrahepatic cholangiocarcinoma.
10.1073/pnas.2002672117
Rescue of Advanced Pompe Disease in Mice with Hepatic Expression of Secretable Acid α-Glucosidase.
10.1016/j.ymthe.2020.05.025
Photocatalytically Active Graphitic Carbon Nitride as an Effective and Safe 2D Material for In Vitro and In Vivo Photodynamic Therapy.
10.1002/smll.201904619
Coronary arterial development is regulated by a Dll4-Jag1-EphrinB2 signaling cascade.
10.7554/elife.49977
Nanog regulates Pou3f1 expression at the exit from pluripotency during gastrulation.
10.1242/bio.046367
PGC‐1α deficiency causes spontaneous kidney inflammation and increases the severity of nephrotoxic AKI
10.1002/path.5282
Liver expression of secretable GAA rescues advanced Pompe disease at the biochemical, functional, and transcriptional level in Gaa mice
10.1016/j.ymgme.2019.11.070
Functional, biochemical and transcriptional rescue of advanced Pompe disease in mice with liver expression of secretable GAA
10.1016/j.ymgme.2018.12.069
Von Hippel-Lindau Protein Is Required for Optimal Alveolar Macrophage Terminal Differentiation, Self-Renewal, and Function
10.1016/j.celrep.2018.07.034
Prokaryotic diversity and community composition in the Salar de Uyuni, a large scale, chaotropic salt flat
10.1111/1462-2920.13876
Global assessment of small RNAs reveals a non-coding transcript involved in biofilm formation and attachment in Acinetobacter baumannii ATCC 17978
10.1371/journal.pone.0182084
Myocardial VHL-HIF Signaling Controls an Embryonic Metabolic Switch Essential for Cardiac Maturation
10.1016/j.devcel.2016.11.012
Solar Radiation Stress in Natural Acidophilic Biofilms of Euglena mutabilis Revealed by Metatranscriptomics and PAM Fluorometry
10.1016/j.protis.2015.12.003
The biodegradation network, a new scenario for computational systems biology research
10.1007/978-3-540-25974-9_23
TRANSCRIPTION OF SPOIVB IS THE ONLY ROLE OF SIGMA(G) THAT IS ESSENTIAL FOR PRO-SIGMA(K) PROCESSING DURING SPORE FORMATION IN BACILLUS-SUBTILIS
10.1128/JB.177.16.4825-4827.1995
A NEW BETA-LACTAM-BINDING PROTEIN DERIVED FROM PENICILLIN-BINDING PROTEIN-3 OF ESCHERICHIA-COLI
10.1128/JB.171.9.5194-5198.1989
MEMBRANE INTERMEDIATES IN THE PEPTIDOGLYCAN METABOLISM OF ESCHERICHIA-COLI - POSSIBLE ROLES OF PBP-1B AND PBP-3
10.1128/JB.174.11.3549-3557.1992
Evaluation of protein A gene polymorphic region DNA sequencing for typing of Staphylococcus aureus strains
10.2337/DIAB.30.7.613
Expression of miR-135b in Psoriatic Skin and Its Association with Disease Improvement
10.3390/cells9071603
Activation of amino acid metabolic program in response to impaired glycolysis in cardiac HIF1 deficient mice
10.1101/2020.05.23.111674
Caveolin1 and YAP drive mechanically induced mesothelial to mesenchymal transition and fibrosis
10.1038/s41419-020-02822-1
Sox17 Controls Emergence and Remodeling of Nestin-Expressing Coronary Vessels
10.1161/circresaha.120.317121
Abstract 16335: Metabolic Reprogramming From Glycolysis to Amino Acid Utilization in Cardiac Hif1 Alpha Deficient Mice
10.1161/circ.142.suppl_3.16335
MiRNA post-transcriptional modification dynamics in T cell activation
10.1016/j.isci.2021.102530
DNGR-1 limits Flt3L-mediated antitumor immunity by restraining tumor-infiltrating type I conventional dendritic cells
10.1136/jitc-2020-002054
Zulema Udaondo
Udaondo Zulema
ORCID: 0000-0003-3445-6842
Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli.
10.1111/1758-2229.12553
The pangenome of the genus Clostridium.
10.1111/1462-2920.13732
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics.
10.1128/genomea.01752-16
Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.
10.3389/fmicb.2016.02100
Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene.
10.1111/1462-2920.13585
Pseudomonas putida as a platform for the synthesis of aromatic compounds.
10.1099/mic.0.000333
Specific Gene Loci of Clinical Pseudomonas putida Isolates.
10.1371/journal.pone.0147478
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid.
10.1128/genomea.00373-16
First- and second-generation biochemicals from sugars: biosynthesis of itaconic acid.
10.1111/1751-7915.12333
Draft Genome Sequence of Pseudomonas putida JLR11, a Facultative Anaerobic 2,4,6-Trinitrotoluene Biotransforming Bacterium.
10.1128/genomea.00904-15
Analysis of the core genome and pangenome of Pseudomonas putida.
10.1111/1462-2920.13015
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features.
10.1016/j.syapm.2015.07.002
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics.
10.1111/1751-7915.12295
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida.
10.1093/femsre/fuv006
Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E.
10.1111/1462-2920.12775
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J.
10.1111/1758-2229.12245
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440.
10.1111/1758-2229.12167
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital.
10.1371/journal.pone.0081604
Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234.
10.1128/genomea.00496-13
Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome.
10.1111/1751-7915.12061
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1.
10.1111/1462-2920.12037
Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS.
10.1371/journal.pone.0039390
Evolution of antibiotic resistance, catabolic pathways and niche colonization.
10.1111/j.1751-7915.2012.00335.x
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.
10.1016/j.febslet.2012.07.031
Mining for novel antibiotics in the age of antimicrobial resistance.
10.1111/1751-7915.13662
Developing robust protein analysis profiles to identify bacterial acid phosphatases in genomes and metagenomic libraries.
10.1111/1462-2920.15138
Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing.
10.1093/ofid/ofaa180
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide.
10.3389/fmicb.2020.00202
Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
10.1128/mra.01380-19
Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
10.1016/j.meegid.2019.103965
Microbiomes as the new keystone for life sciences development.
10.1111/1751-7915.13424
Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
10.1128/mra.00222-19
Towards a better metabolic engineering reference: the microbial chassis.
10.1111/1751-7915.13363
Genome Sequence of the Oocydin A-Producing Rhizobacterium Serratia plymuthica 4Rx5.
10.1128/mra.00997-18
Ruminal metagenomic libraries as a source of relevant hemicellulolytic enzymes for biofuel production.
10.1111/1751-7915.13269
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators.
10.1111/1751-7915.13263
Fighting the enemy: one health approach against microbial resistance
10.1111/1751-7915.13587
Plasma Metabolomics in a Nonhuman Primate Model of Abdominal Radiation Exposure
10.3390/metabo11080540
Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
10.3390/life11080862
