Characterization of molecular interactions using isothermal titration calorimetry
Krell, Tino Lacal, Jesus Garcia-Fontana, Cristina Silva-Jimenez, Hortencia Rico-Jimenez, Miriam Corral Lugo, Andres Reyes Darias, Jose Antonio Ramos, Juan-Luis Filloux, A Ramos, JL
Methods in molecular biology (Clifton, N.J.), 2014
https://doi.org/10.1007/978-1-4939-0473-0_16
Cristina Garcia Fontana
Garcia Fontana Cristina
ORCID: 0000-0002-9328-6022
Qualitative and quantitative assays for flagellum-mediated chemotaxis 10.1007/978-1-4939-0473-0_10
Sensing of environmental signals: Classification of chemoreceptors according to the size of their ligand binding regions 10.1111/j.1462-2920.2010.02325.x
Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA) 10.1111/mmi.12255
Characterization of molecular interactions using isothermal titration calorimetry 10.1007/978-1-4939-0473-0_16
Responses of Pseudomonas putida to toxic aromatic carbon sources 10.1016/j.jbiotec.2012.01.026
Genes Encoding Cher-TPR Fusion Proteins Are Predominantly Found in Gene Clusters Encoding Chemosensory Pathways with Alternative Cellular Functions 10.1371/journal.pone.0045810
Structural biology: Specificity of the CheR2 methyltransferase in pseudomonas aeruginosa is directed by a C-terminal pentapeptide in the McpB chemoreceptor 10.1126/scisignal.2004849
High specificity in CheR methyltransferase function: CheR2 of pseudomonas putida is essential for chemotaxis, whereas CheR1 is involved in biofilm formation 10.1074/jbc.M113.472605
Diversity at its best: Bacterial taxis 10.1111/j.1462-2920.2010.02383.x
Multiple signals modulate the activity of the complex sensor kinase TodS 10.1111/1751-7915.12142
Tactic responses to pollutants and their potential to increase biodegradation efficiency 10.1111/jam.12076
Study of the TmoS/TmoT two-component system: Towards the functional characterization of the family of TodS/TodT like systems 10.1111/j.1751-7915.2011.00322.x
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor 10.1002/jmr.1101
Genome Sequence of Microbacterium sp. Strain 3J1, a Highly Desiccation-Tolerant Bacterium That Promotes Plant Growth. 10.1128/genomea.00713-15
Genome Sequence of Arthrobacter koreensis 5J12A, a Plant Growth-Promoting and Desiccation-Tolerant Strain. 10.1128/genomea.00648-15
Genome Sequence of Rhodococcus sp. 4J2A2, a Desiccation-Tolerant Bacterium Involved in Biodegradation of Aromatic Hydrocarbons. 10.1128/genomea.00592-15
The involvement of McpB chemoreceptor from Pseudomonas aeruginosa PAO1 in virulence 10.1038/s41598-019-49697-7
Epidemiological, Clinical and Genetic Study of Hypophosphatasia in A Spanish Population: Identification of Two Novel Mutations in The Alpl Gene. 10.1038/s41598-019-46004-2
Circulating levels of sclerostin are associated with cardiovascular mortality 10.1371/journal.pone.0199504
Anthracene drives sub-cellular proteome-wide alterations in the degradative system of Penicillium oxalicum. 10.1016/j.ecoenv.2018.04.051
A New Physiological Role for the DNA Molecule as a Protector against Drying Stress in Desiccation-Tolerant Microorganisms. 10.3389/fmicb.2016.02066
Profile of the Spatial Distribution Patterns of the Human and Bacteriophage Virome in a Wastewater Treatment Plant Located in the South of Spain 10.3390/w12082316
Hypophosphatasia: A Unique Disorder of Bone Mineralization 10.3390/ijms22094303
Osteoglycin as a Potential Biomarker of Mild Kidney Function Impairment in Type 2 Diabetes Patients 10.3390/jcm10102209
Andrés Corral Lugo
Corral Lugo Andrés
ORCID: 0000-0002-3452-4131
Vaccines for multidrug resistant Gram negative bacteria: lessons from the past for guiding future success. 10.1093/femsre/fuaa054
Identification and Analysis of Unstructured, Linear B-Cell Epitopes in SARS-CoV-2 Virion Proteins for Vaccine Development. 10.3390/vaccines8030397
High-Affinity Chemotaxis to Histamine Mediated by the TlpQ Chemoreceptor of the Human Pathogen Pseudomonas aeruginosa. 10.1128/mbio.01894-18
The plant compound rosmarinic acid induces a broad quorum sensing response in Pseudomonas aeruginosa PAO1. 10.1111/1462-2920.14301
Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida. 10.1016/j.jmb.2018.05.008
Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures. 10.1016/j.pep.2016.10.007
So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals. 10.1080/19420889.2016.1156832
Assessment of the contribution of chemoreceptor-based signalling to biofilm formation. 10.1111/1462-2920.13170
Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator. 10.1126/scisignal.aaa8271
Identification of ligands for bacterial sensor proteins. 10.1007/s00294-015-0528-4
McpQ is a specific citrate chemoreceptor that responds preferentially to citrate/metal ion complexes. 10.1111/1462-2920.13030
Identification of a chemoreceptor that specifically mediates chemotaxis toward metabolizable purine derivatives. 10.1111/mmi.13215
Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle. 10.1111/mmi.13045
Specificity of the CheR2 methyltransferase in Pseudomonas aeruginosa is directed by a C-terminal pentapeptide in the McpB chemoreceptor. 10.1126/scisignal.2004849
Characterization of molecular interactions using isothermal titration calorimetry. 10.1007/978-1-4939-0473-0_16
Qualitative and quantitative assays for flagellum-mediated chemotaxis. 10.1007/978-1-4939-0473-0_10
Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa. 10.1111/1462-2920.13871
Identification and Characterization of Bacterial Chemoreceptors Using Quantitative Capillary and Gradient Plate Chemotaxis Assays 10.21769/bioprotoc.1789
Microcalorimetry as a General Technique to Characterize Ligand Binding 10.1007/8623_2014_3
Tino Krell
Krell Tino
ORCID: 0000-0002-9040-3166
Prevalence and Specificity of Chemoreceptor Profiles in Plant-Associated Bacteria 10.1128/mSystems.00951-21
Identification of ligands for bacterial sensor proteins 10.1007/s00294-015-0528-4
Identification of a chemoreceptor for C2 and C3 carboxylic acids 10.1128/AEM.01529-15
Correlation between signal input and output in PctA and PctB amino acid chemoreceptor of Pseudomonas aeruginosa 10.1111/mmi.12953
Multiple signals modulate the activity of the complex sensor kinase TodS 10.1111/1751-7915.12142
Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle 10.1111/mmi.13045
Tackling the bottleneck in bacterial signal transduction research: High-throughput identification of signal molecules 10.1111/mmi.12975
Pseudomonas chemotaxis 10.1111/1574-6976.12081
RecA protein plays a role in the chemotactic response and chemoreceptor clustering of Salmonella enterica 10.1371/journal.pone.0105578
Structural biology: Specificity of the CheR2 methyltransferase in pseudomonas aeruginosa is directed by a C-terminal pentapeptide in the McpB chemoreceptor 10.1126/scisignal.2004849
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor 10.1128/JB.00589-13
Fructooligosacharides reduce Pseudomonas aeruginosa PAO1 pathogenicity through distinct mechanisms 10.1371/journal.pone.0085772
Qualitative and quantitative assays for flagellum-mediated chemotaxis 10.1007/978-1-4939-0473-0_10
Characterization of molecular interactions using isothermal titration calorimetry 10.1007/978-1-4939-0473-0_16
Fructose 1-phosphate is the one and only physiological effector of the Cra (FruR) regulator of Pseudomonas putida 10.1016/j.fob.2014.03.013
GtrS and GltR form a two-component system: The central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa 10.1093/nar/gku496
The HBM domain: Introducing bimodularity to bacterial sensing 10.1002/pro.2410
Transcriptional control by two interacting regulatory proteins: Identification of the PtxS binding site at PtxR 10.1093/nar/gkt773
The Pseudomonas putidaHskA hybrid sensor kinase responds to redox signals and contributes to the adaptation of the electron transport chain composition in response to oxygen availability 10.1111/1758-2229.12083
Purification, crystallization and preliminary crystallographic analysis of the ligand-binding regions of the PctA and PctB chemoreceptors from Pseudomonas aeruginosa in complex with amino acids 10.1107/S1744309113023592
High specificity in CheR methyltransferase function: CheR2 of pseudomonas putida is essential for chemotaxis, whereas CheR1 is involved in biofilm formation 10.1074/jbc.M113.472605
Bioavailability of pollutants and chemotaxis 10.1016/j.copbio.2012.08.011
Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA) 10.1111/mmi.12255
The Pseudomonas putida HskA hybrid sensor kinase controls the composition of the electron transport chain 10.1111/1758-2229.12017
Tactic responses to pollutants and their potential to increase biodegradation efficiency 10.1111/jam.12076
Evidence for chemoreceptors with bimodular ligand-binding regions harboring two signal-binding sites 10.1073/pnas.1201400109
In situ X-ray data collection from highly sensitive crystals of Pseudomonas putida PtxS in complex with DNA 10.1107/S1744309112028540
Genes Encoding Cher-TPR Fusion Proteins Are Predominantly Found in Gene Clusters Encoding Chemosensory Pathways with Alternative Cellular Functions 10.1371/journal.pone.0045810
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants 10.1016/j.febslet.2012.07.031
Responses of Pseudomonas putida to toxic aromatic carbon sources 10.1016/j.jbiotec.2012.01.026
Genes for Carbon metabolism and the ToxA virulence factor in pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS 10.1371/journal.pone.0039390
Identification of a novel calcium binding motif based on the detection of sequence insertions in the animal peroxidase domain of bacterial proteins 10.1371/journal.pone.0040698
Study of the TmoS/TmoT two-component system: Towards the functional characterization of the family of TodS/TodT like systems 10.1111/j.1751-7915.2011.00322.x
Solvent tolerance in Gram-negative bacteria 10.1016/j.copbio.2011.11.015
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas 10.1111/j.1758-2229.2011.00255.x
Construction of a prototype two-component system from the phosphorelay system TodS/TodT 10.1093/protein/gzs001
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate 10.1107/S1744309112004940
The Crp regulator of Pseudomonas putida: Evidence of an unusually high affinity for its physiological effector, cAMP 10.1111/j.1462-2920.2011.02622.x
Laboratory research aimed at closing the gaps in microbial bioremediation 10.1016/j.tibtech.2011.06.007
Effect of the β-propiolactone treatment on the adsorption and fusion of influenza A/Brisbane/59/2007 and A/New Caledonia/20/1999 virus H1N1 on a dimyristoylphosphatidylcholine/ganglioside GM3 mixed phospholipids monolayer at the air-water interface 10.1021/la2027175
Unbinding forces of single pertussis toxin-antibody complexes measured by atomic force spectroscopy correlate with their dissociation rates determined by surface plasmon resonance 10.1002/jmr.1159
Three dimensional morphology of rabies virus studied by cryo-electron tomography 10.1016/j.jsb.2011.07.003
Intramolecular signal transmission in a tetrameric repressor of the IclR family 10.1073/pnas.1018894108
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment 10.1111/j.1462-2920.2011.02492.x
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas 10.1111/j.1462-2920.2011.02493.x
Diversity at its best: Bacterial taxis 10.1111/j.1462-2920.2010.02383.x
Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida 10.1074/jbc.M110.187583
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor 10.1002/jmr.1101
Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators 10.1101/gad.603510
Sensing of environmental signals: Classification of chemoreceptors according to the size of their ligand binding regions 10.1111/j.1462-2920.2010.02325.x
Bacterial sensor kinases: Diversity in the recognition of environmental signals 10.1146/annurev.micro.112408.134054
Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor 10.1128/JB.00520-10
Catabolite repression of the TodS/TodT two-component system and effector-dependent transphosphorylation of TodT as the basis for toluene dioxygenase catabolic pathway control 10.1128/JB.00379-10
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: Differential chemotactic response towards receptor ligands 10.1074/jbc.M110.110403
Struggling to get a universal meningococcal vaccine and novel uses for bacterial toxins in cancer treatment 10.1111/j.1751-7915.2010.00195.x
PhhR Binds to Target Sequences at Different Distances with Respect to RNA Polymerase in Order to Activate Transcription 10.1016/j.jmb.2009.09.045
The heat, drugs and knockout systems of Microbial Biotechnology 10.1111/j.1751-7915.2009.00144.x
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Responses of Pseudomonas to small toxic molecules by a mosaic of domains 10.1016/j.mib.2009.02.001
Two Levels of Cooperativeness in the Binding of TodT to the tod Operon Promoter 10.1016/j.jmb.2008.10.011
Hexameric oligomerization of mitochondrial peroxiredoxin PrxIIF and formation of an ultrahigh affinity complex with its electron donor thioredoxin Trx-o 10.1093/jxb/ern177
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Biochemical and molecular characterization of the mitochondrial peroxiredoxin PsPrxII F from Pisum sativum 10.1016/j.plaphy.2007.07.017
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Optimization of the Palindromic Order of the TtgR Operator Enhances Binding Cooperativity 10.1016/j.jmb.2007.04.025
The Transcriptional Repressor TtgV Recognizes a Complex Operator as a Tetramer and Induces Convex DNA Bending 10.1016/j.jmb.2007.04.022
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials 10.1016/j.jmb.2007.03.062
Different modes of binding of mono- and biaromatic effectors to the transcriptional regulator TTGV: Role in differential derepression from its cognate operator 10.1074/jbc.M610032200
The use of microcalorimetry to study regulatory mechanisms in pseudomonas 10.1007/978-1-4020-6097-7_9
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins 10.1073/pnas.0602902103
The IclR family of transcriptional activators and repressors can be defined by a single profile 10.1110/ps.051857206
Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression 10.1074/jbc.M511095200
Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors 10.1111/j.1574-6976.2005.00008.x
Characterization of different strains of poliovirus and influenza virus by differential scanning calorimetry 10.1042/BA20040113
The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: Evidence from isothermal titration calorimetry 10.1074/jbc.M500783200
Do Th1 or Th2 sequence motifs exist in proteins? Identification of amphipatic immunomodulatory domains in Helicobacter pylori catalase 10.1016/j.imlet.2004.09.011
Role of transferrin receptor from a Neisseria meningitidis tbpB isotype II strain in human transferrin binding and virulence 10.1128/IAI.72.6.3461-3470.2004
HIV-1 gp41 and gp160 are hyperthermostable proteins in a mesophilic environment: Characterization of gp41 mutants 10.1111/j.1432-1033.2004.04068.x
Transferrin-Binding Protein B of Neisseria meningitidis: Sequence-Based Identification of the Transferrin-Binding Site Confirmed by Site-Directed Mutagenesis 10.1128/JB.186.3.850-857.2004
The use of microcalorimetry to characterize tetanus neurotoxin, pertussis toxin and filamentous haemagglutinin 10.1042/BA20030089
Insight into the structure and function of the transferrin receptor from Neisseria meningitidis using microcalorimetric techniques 10.1074/jbc.M204461200
Affinity-purification of Transferrin-binding protein B under nondenaturing conditions 10.1006/prep.2001.1593
The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor 10.1016/S0969-2126(02)00747-5
The shikimate pathway and its branches in apicomplexan parasites 10.1086/338004
Sequence requirements of the ATP-binding site within the C-terminal nucleotide-binding domain of mouse P-glycoprotein: Structure-activity relationships for flavonoid binding 10.1021/bi010657c
Biochemical and X-ray crystallographic studies on shikimate kinase: The important structural role of the P-loop lysine 10.1110/ps.52501
The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction 10.1038/9287
The folding and assembly of the dodecameric type II dehydroquinases 10.1042/0264-6021:3380195
Evidence for the shikimate pathway in apicomplexan parasites 10.1038/31723
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Crystallization and preliminary X-ray crystallographic analysis of shikimate kinase from Erwinia chrysanthemi 10.1107/S0907444997004319
Localization of the active site of type II dehydroquinases. Identification of a common arginine-containing motif in the two classes of dehydroquinases 10.1074/jbc.271.40.24492
Phosphoglycerate mutase from Schizosaccharomyces pombe: Development of an expression system and characterisation of three histidine mutants of the enzyme 10.1016/0167-4838(96)00046-5
The use of electrospray mass spectrometry to identify an essential arginine residue in type II dehydroquinases 10.1016/0014-5793(95)00083-L
The use of mass spectrometry to examine the formation and hydrolysis of the phosphorylated form of phosphoglycerate mutase 10.1016/0014-5793(95)00044-A
Identification and purification of a distinct dihydrolipoamide dehydrogenase from pea chloroplasts 10.1007/bf00208309
Microcalorimetry as a General Technique to Characterize Ligand Binding 10.1007/8623_2014_3
The Use of Microcalorimetric Techniques to Study the Structure and Function of the Transferrin Receptor from Neisseria meningitidis 10.1007/978-3-662-08722-0_14
The folding and assembly of the dodecameric type II dehydroquinases 10.1042/bj3380195
Chemical modification monitored by electrospray mass spectrometry: a rapid and simple method for identifying and studying functional residues in enzymes 10.1111/j.1399-3011.1998.tb01217.x
Identification of a chemoreceptor that specifically mediates chemotaxis toward metabolizable purine derivatives 10.1111/mmi.13215
Molecular Responses to Solvent Stress: Strategies for Living in Unpalatable Substrates 10.1007/978-4-431-53898-1_47
McpQ is a specific citrate chemoreceptor that responds preferentially to citrate/metal ion complexes 10.1111/1462-2920.13030
Paralogous Regulators ArsR1 and ArsR2 of Pseudomonas putida KT2440 as a Basis for Arsenic Biosensor Development 10.1128/AEM.00606-16
Genome Sequence of Serratia plymuthica A153, a Model Rhizobacterium for the Investigation of the Synthesis and Regulation of Haterumalides, Zeamine, and Andrimid 10.1128/genomeA.00373-16
The expression of many chemoreceptor genes depends on the cognate chemoeffector as well as on the growth medium and phase 10.1007/s00294-016-0646-7
Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures 10.1016/j.pep.2016.10.007
Disparate response to microoxia and nitrogen oxides of the Bradyrhizobium japonicum napEDABC, nirK and norCBQD denitrification genes 10.1016/j.niox.2017.02.002
Genome Sequence of Serratia marcescens MSU97, a Plant-Associated Bacterium That Makes Multiple Antibiotics 10.1128/genomeA.01752-16
Recent Advances and Future Prospects in Bacterial and Archaeal Locomotion and Signal Transduction 10.1128/JB.00203-17
Sensory Repertoire of Bacterial Chemoreceptors 10.1128/MMBR.00033-17
Exploring the (Almost) Unknown: Archaeal Two-Component Systems 10.1128/JB.00774-17
The plant compound rosmarinic acid induces a broad quorum sensing response in Pseudomonas aeruginosa PAO1 10.1111/1462-2920.14301
An auxin controls bacterial antibiotics production 10.1093/nar/gky766
Recognition of dominant attractants by key chemoreceptors mediates recruitment of plant growth‐promoting rhizobacteria 10.1111/1462-2920.14472
Functional Annotation of Bacterial Signal Transduction Systems: Progress and Challenges 10.3390/ijms19123755
The Molecular Mechanism of Nitrate Chemotaxis via Direct Ligand Binding to the PilJ Domain of McpN 10.1128/mBio.02334-18
The involvement of McpB chemoreceptor from Pseudomonas aeruginosa PAO1 in virulence 10.1038/s41598-019-49697-7
Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato 10.1128/mBio.01868-19
How Bacterial Chemoreceptors Evolve Novel Ligand Specificities 10.1128/mBio.03066-19
The use of isothermal titration calorimetry to unravel chemotactic signalling mechanisms 10.1111/1462-2920.15035
Full Transcriptomic Response of Pseudomonas aeruginosa to an Inulin-Derived Fructooligosaccharide 10.3389/fmicb.2020.00202
Determination of ligand profiles for pseudomonas aeruginosa solute binding proteins 10.3390/ijms20205156
Concentration dependent effect of plant root exudates on the chemosensory systems of Pseudomonas putida KT2440 10.3389/fmicb.2019.00078
High-Affinity Chemotaxis to Histamine Mediated by the TlpQ Chemoreceptor of the Human Pathogen Pseudomonas aeruginosa. 10.1128/mbio.01894-18
Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida 10.1016/j.jmb.2018.05.008
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators 10.1111/1751-7915.13263
The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists 10.1038/s41598-018-20283-7
The effect of bacterial chemotaxis on host infection and pathogenicity 10.1093/femsre/fux052
High-throughput screening to identify chemoreceptor ligands 10.1007/978-1-4939-7577-8_23
Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa 10.1073/pnas.1708842114
Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa 10.1111/1462-2920.13871
Metabolic value chemoattractants are preferentially recognized at broad ligand range chemoreceptor of Pseudomonas putida KT2440 10.3389/fmicb.2017.00990
Riboswitches as potential targets for the development of anti-biofilm drugs 10.2174/1568026617666170407163517
Chemoreceptor-based signal sensing 10.1016/j.copbio.2016.11.021
Identification of a chemoreceptor in Pseudomonas aeruginosa that specifically mediates chemotaxis toward α-ketoglutarate 10.3389/fmicb.2016.01937
Two different mechanisms mediate chemotaxis to inorganic phosphate in Pseudomonas aeruginosa 10.1038/srep28967
Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator 10.1126/scisignal.aaa8271
Biosynthesis of the acetyl-coA carboxylase-inhibiting antibiotic, andrimid in Serratia is regulated by hfq and the LysR-type transcriptional regulator, admX 10.1111/1462-2920.13241
Assessment of the contribution of chemoreceptor-based signalling to biofilm formation 10.1111/1462-2920.13170
So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals 10.1080/19420889.2016.1156832
Identification and Characterization of Bacterial Chemoreceptors Using Quantitative Capillary and Gradient Plate Chemotaxis Assays 10.21769/bioprotoc.1789
Shikimate pathway in apicomplexan parasites 10.1038/16618
Degeneration of rat cholinergic basal forebrain neurons and reactive changes in nerve growth factor expression after chronic neurotoxic injury--I. Degeneration and plastic response of basal forebrain neurons. 10.1016/0306-4522(94)00526-b
Degeneration of rat cholinergic basal forebrain neurons and reactive changes in nerve growth factor expression after chronic neurotoxic injury--II. Reactive expression of the nerve growth factor gene in astrocytes. 10.1016/0306-4522(94)00523-8
Sensing, Signaling, and Uptake: An Introduction 10.1007/978-3-319-50542-8_29
The Family of Two-Component Systems That Regulate Hydrocarbon Degradation Pathways 10.1007/978-3-319-50542-8_6
Genetics of Sensing, Accessing, and Exploiting Hydrocarbons 10.1007/978-3-319-50542-8_46
Extrusion Pumps for Hydrocarbons: An Efficient Evolutionary Strategy to Confer Resistance to Hydrocarbons 10.1007/978-3-319-50542-8_47
Membrane Composition and Modifications in Response to Aromatic Hydrocarbons in Gram-Negative Bacteria 10.1007/978-3-319-50542-8_48
Plant growth promotion and biocontrol mediated by plant associated bacteria 10.1007/978-981-10-5514-0
Two-Component Systems that Control the Expression of Aromatic Hydrocarbon Degradation Pathways 10.1002/9781119004813.ch21
Microcalorimetry as a General Technique to Characterize Ligand Binding: What Needs to be Considered When Analyzing Hydrocarbons 10.1007/978-3-540-77587-4_331
Protocols for the Characterization of Solvent Tolerant Microorganisms: Construction and Characterization of Mutants 10.1007/978-3-540-77587-4_309
Genetics of Accessing and Exploiting Hydrocarbons 10.1007/978-3-540-77587-4_109
Removal of Hydrocarbons and Other Related Chemicals via the Rhizosphere of Plants 10.1007/978-3-540-77587-4_190
Extrusion Pumps for Hydrocarbons: An Efficient Evolutionary Strategy to Confer Resistance to Hydrocarbons 10.1007/978-3-540-77587-4_110
Membrane Composition and Modifications in Response to Aromatic Hydrocarbons in Gram Negative Bacteria 10.1007/978-3-540-77587-4_111
The structural basis for signal promiscuity in a bacterial chemoreceptor 10.1111/febs.15580
Evidence for Pentapeptide-Dependent and Independent CheB Methylesterases 10.3390/ijms21228459
Reply: Shikimate pathway in apicomplexan parasites 10.1038/16621
Chemoreceptors with C-terminal pentapeptides for CheR and CheB binding are abundant in bacteria that maintain host interactions 10.1016/j.csbj.2020.07.006
Pseudomonas aeruginosa as a Model To Study Chemosensory Pathway Signaling 10.1128/MMBR.00151-20
Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae 10.1038/s41522-020-00177-1
Low CyaA expression and anti‐cooperative binding of cAMP to CRP frames the scope of the cognate regulon of Pseudomonas putida 10.1111/1462-2920.15422
Amino acid sensor conserved from bacteria to humans 10.1101/2021.05.05.442820
Histamine: A Bacterial Signal Molecule 10.3390/ijms22126312
Chemotaxis of Beneficial Rhizobacteria to Root Exudates: The First Step towards Root–Microbe Rhizosphere Interactions 10.3390/ijms22136655
Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae 10.1128/MRA.00559-21
A catalogue of signal molecules that interact with sensor kinases, chemoreceptors and transcriptional regulators 10.1093/femsre/fuab043
Jesus Lacal Romero
Lacal Romero Jesus
ORCID: 0000-0002-2751-7291
Characterization of Molecular Interactions Using Isothermal Titration Calorimetry 10.1007/978-1-4939-0473-0_16
Internal Sense of Direction: Sensing and Signaling from Cytoplasmic Chemoreceptors 10.1128/MMBR.00033-14
Bioavailability of pollutants and chemotaxis 10.1016/j.copbio.2012.08.011
Daydreamer, a Ras effector and GSK-3 substrate, is important for directional sensing and cell motility 10.1091/mbc.E12-04-0271
Tactic responses to pollutants and their potential to increase biodegradation efficiency 10.1111/jam.12076
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants 10.1016/j.febslet.2012.07.031
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate 10.1107/S1744309112004940
Evidence for chemoreceptors with bimodular ligand-binding regions harboring two signal-binding sites 10.1073/pnas.1201400109
Responses of Pseudomonas putida to toxic aromatic carbon sources 10.1016/j.jbiotec.2012.01.026
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas 10.1111/j.1462-2920.2011.02493.x
Diversity at its best: bacterial taxis 10.1111/j.1462-2920.2010.02383.x
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor 10.1002/jmr.1101
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment 10.1111/j.1462-2920.2011.02492.x
Bacterial Sensor Kinases: Diversity in the Recognition of Environmental Signals 10.1146/annurev.micro.112408.134054
Catabolite Repression of the TodS/TodT Two-Component System and Effector-Dependent Transphosphorylation of TodT as the Basis for Toluene Dioxygenase Catabolic Pathway Control 10.1128/JB.00379-10
Identification of a Chemoreceptor for Tricarboxylic Acid Cycle Intermediates DIFFERENTIAL CHEMOTACTIC RESPONSE TOWARDS RECEPTOR LIGANDS 10.1074/jbc.M110.110403
Sensing of environmental signals: classification of chemoreceptors according to the size of their ligand binding regions 10.1111/j.1462-2920.2010.02325.x
The enigma of cytosolic two-component systems: a hypothesis 10.1111/j.1758-2229.2009.00020.x
The Sensor Kinase TodS Operates by a Multiple Step Phosphorelay Mechanism Involving Two Autokinase Domains 10.1074/jbc.M900521200
Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter 10.1016/j.jmb.2007.12.004
Two Levels of Cooperativeness in the Binding of TodT to the tod Operon Promoter 10.1016/j.jmb.2008.10.011
Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals 10.1073/pnas.0701547104
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins 10.1073/pnas.0602902103
A Gα-Stimulated RapGEF Is a Receptor-Proximal Regulator of Dictyostelium Chemotaxis 10.1016/j.devcel.2016.05.001
Connecting G protein signaling to chemoattractant-mediated cell polarity and cytoskeletal reorganization 10.1080/21541248.2016.1235390
The Dictyostelium GSK3 kinase GlkA coordinates signal relay and chemotaxis in response to growth conditions 10.1016/j.ydbio.2018.01.007
The use of microcalorimetry to study regulatory mechanisms in pseudomonas 10.1007/978-1-4020-6097-7_9
Phosphodiesterase PdeD, dynacortin, and a Kelch repeat-containing protein are direct GSK3 substrates in Dictyostelium that contribute to chemotaxis towards cAMP 10.1111/1462-2920.14126
Proteomic and Transcriptomic Profiling Identifies Early Developmentally Regulated Proteins in Dictyostelium Discoideum. 10.3390/cells8101187
Dictyostelium discoideum as a non‐mammalian biomedical model 10.1111/1751-7915.13692
Integrated in silico MS-based phosphoproteomics and network enrichment analysis of RASopathy proteins 10.1186/s13023-021-01934-x
Juan L. Ramos
Ramos Juan L.
ORCID: 0000-0002-8731-7435
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J 10.1111/1758-2229.12245
A set of activators and repressors control peripheral glucose pathways in Pseudomonas putida to yield a common central intermediate 10.1128/JB.01726-07
Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA) 10.1111/mmi.12255
Identification of products resulting from the biological reduction of 2,4,6-trinitrotoluene, 2,4-dinitrotoluene, and 2,6-dinitrotoluene by Pseudomonas sp. 10.1021/es950824u
Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas 10.1111/j.1462-2920.2011.02493.x
Two Levels of Cooperativeness in the Binding of TodT to the tod Operon Promoter 10.1016/j.jmb.2008.10.011
PpoR, an orphan LuxR-family protein of Pseudomonas putida KT2440, modulates competitive fitness and surface motility independently of N-acylhomoserine lactones 10.1111/j.1758-2229.2010.00190.x
Transcriptional tradeoff between metabolic and stress-response programs in Pseudomonas putida KT2440 cells exposed to toluene 10.1074/jbc.M509848200
Metabolism of 2,4,6-trinitrotoluene by Pseudomonas sp. JLR11 10.1021/es9803308
Monitoring drivers’ ventilation using an electrical bioimpedance system: Tests in a controlled environment 10.1007/978-3-662-44485-62
High specificity in CheR methyltransferase function: CheR2 of pseudomonas putida is essential for chemotaxis, whereas CheR1 is involved in biofilm formation 10.1074/jbc.M113.472605
Twenty one important things you should know 10.1111/j.1751-7915.2009.00128.x
GtrS and GltR form a two-component system: The central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa 10.1093/nar/gku496
Role of iron and the TonB system in colonization of corn seeds and roots by Pseudomonas putida KT2440 10.1111/j.1462-2920.2004.00720.x
Involvement of ammonium metabolism in the nitrate inhibition of nitrogen fixation in Anabaena sp. strain ATCC 33047 10.1007/BF00404777
Cellular XylS Levels Are a Function of Transcription of xylS from Two Independent Promoters and the Differential Efficiency of Translation of the Two mRNAs 10.1128/JB.186.6.1898-1901.2003
Tactic responses to pollutants and their potential to increase biodegradation efficiency 10.1111/jam.12076
Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E 10.1128/JB.183.13.3967-3973.2001
Erratum: Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: In vivo expression technology capture and identification of root-activated promoters (Journal of Bacteriology (2005) 187, 12 (4033-4041)) 10.1128/JB.187.15.5504.2005
Sugar (ribose), spice (peroxidase) and all things nice (laccase hair-dyes) 10.1111/j.1751-7915.2010.00167.x
Photoproduction of ammonia from nitrate by Anacystis nidulans cells 10.1016/0005-2728(82)90303-6
Construction of a prototype two-component system from the phosphorelay system TodS/TodT 10.1093/protein/gzs001
Diversity of small RNAs expressed in Pseudomonas species 10.1111/1758-2229.12233
Identification and characterization of the PhhR regulon in Pseudomonas putida 10.1111/j.1462-2920.2009.02124.x
Role of the ptsN gene product in catabolite repression of the Pseudomonas putida TOL toluene degradation pathway in chemostat cultures 10.1128/AEM.01067-06
Assimilation of nitrogen from nitrite and trinitrotoluene in Pseudomonas putida JLR11 10.1128/JB.187.1.396-399.2005
Gef gene therapy enhances the therapeutic efficacy of doxorubicin to combat growth of MCF-7 breast cancer cells 10.1007/s00280-009-1135-1
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome 10.1111/1751-7915.12061
Directed evolution, natural products for cancer chemotherapy, and micro-biosensing robots 10.1111/j.1751-7915.2011.00267.x
Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage 10.1038/ismej.2013.242
Role of Pseudomonas putida tol-oprL gene products in uptake of solutes through the cytoplasmic membrane 10.1128/JB.185.16.4707-4716.2003
Roles of effectors in XylS-dependent transcription activation: Intramolecular domain derepression and DNA binding 10.1128/JB.01784-07
Editorial: Variations on transcriptional and post-transcriptional processes in bacteria 10.1111/j.1574-6976.2010.00245.x
In-vivo measurements of heart ischemia using transoesophageal electrical impedance 10.1007/978-3-540-89208-3_278
Synergistic antitumoral effect of combination E gene therapy and Doxorubicin in MCF-7 breast cancer cells 10.1016/j.biopha.2011.01.002
The xylS gene positive regulator of TOL plasmid pWWO: Identification, sequence analysis and overproduction leading to constitutive expression of meta cleavage operon 10.1007/BF00331600
Microorganisms and explosives: Mechanisms of nitrogen release from TNT for use as an n-source for growth 10.1021/es803372n
E phage gene transfection enhances sensitivity of lung and colon cancer cells to chemotherapeutic agents 10.3892/ijo-00000803
The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: Evidence from isothermal titration calorimetry 10.1074/jbc.M500783200
Responses of gram-negative bacteria to certain environmental stressors 10.1016/S1369-5274(00)00183-1
Explorative probes and biomarkers, chronic Salmonella infections and future vaccines 10.1111/j.1751-7915.2011.00315.x
The heat, drugs and knockout systems of Microbial Biotechnology 10.1111/j.1751-7915.2009.00144.x
Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil 10.1111/j.1751-7915.2012.00358.x
A set of genes encoding a second toluene efflux system in Pseudomonas putida DOT-T1E is linked to the tod genes for toluene metabolism 10.1128/JB.182.4.937-943.2000
Evolution of antibiotic resistance, catabolic pathways and niche colonization 10.1111/j.1751-7915.2012.00335.x
Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida 10.1046/j.1365-2958.2001.02310.x
Bioremediation of 2,4,6-trinitrotoluene by bacterial nitroreductase expressing transgenic aspen 10.1021/es801231w
Genes for Carbon metabolism and the ToxA virulence factor in pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS 10.1371/journal.pone.0039390
From the test tube to the environment-and back 10.1111/j.1462-2920.2012.02896.x
Differential transcriptional response to antibiotics by Pseudomonas putidaDOT-T1E 10.1111/1462-2920.12775
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor 10.1128/JB.00589-13
Special issue: The Rhizosphere: Editorial 10.1111/j.1462-2920.2005.00931.x
Two glutaric acid derivatives from olives 10.1016/S0031-9422(97)01066-2
Proteomic analysis reveals the participation of energy- and stress-related proteins in the response of Pseudomonas putida DOT-T1E to toluene 10.1128/JB.187.17.5937-5945.2005
Regression of established subcutaneous B16-F10 murine melanoma tumors after gef gene therapy associated with the mitochondrial apoptotic pathway 10.1111/j.1600-0625.2009.00914.x
Cyclopropane fatty acids are involved in organic solvent tolerance but not in acid stress resistance in Pseudomonas putida DOT-T1E 10.1111/j.1751-7915.2009.00084.x
Plant-dependent active biological containment system for recombinant rhizobacteria 10.1046/j.1462-2920.2003.00544.x
The enigma of cytosolic two-component systems: A hypothesis 10.1111/j.1758-2229.2009.00020.x
Efflux pump-deficient mutants as a platform to search for microbes that produce antibiotics 10.1111/1751-7915.12295
Characterization of the RND family of multidrug efflux pumps: In silico to in vivo confirmation of four functionally distinct subgroups 10.1111/j.1751-7915.2010.00189.x
Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions 10.1007/s00253-009-1928-5
Controlling bacterial physiology for optimal expression of gene reporter constructs 10.1016/j.copbio.2005.12.001
REP code: Defining bacterial identity in extragenic space 10.1111/j.1462-2920.2004.00704.x
Fatty acid-mediated signalling between two Pseudomonas species 10.1111/j.1758-2229.2012.00349.x
Domain cross-talk during effector binding to the multidrug binding TTGR regulator 10.1074/jbc.M110.113282
In vivo and in vitro evidence that TtgV is the specific regulator of the TtgGHI multidrug and solvent efflux pump of Pseudomonas putida 10.1128/JB.185.16.4755-4763.2003
Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1 10.1128/JB.01281-10
Physiological Characterization of Pseudomonas putida DOT-T1E Tolerance to p-Hydroxybenzoate 10.1128/AEM.67.9.4338-4341.2001
The RpoT regulon of Pseudomonas putida DOT-T1E and its role in stress endurance against solvents 10.1128/JB.00950-06
Functional analysis of new transporters involved in stress tolerance in Pseudomonas putida DOT-T1E 10.1111/j.1758-2229.2009.00093.x
Hierarchical Binding of the TodT Response Regulator to Its Multiple Recognition Sites at the tod Pathway Operon Promoter 10.1016/j.jmb.2007.12.004
Retrotransfer of DNA in the rhizosphere 10.1046/j.1462-2920.2000.00109.x
Sequential XylS-CTD binding to the Pm promoter induces DNA bending prior to activation 10.1128/JB.00165-10
The Transcriptional Repressor TtgV Recognizes a Complex Operator as a Tetramer and Induces Convex DNA Bending 10.1016/j.jmb.2007.04.022
Transcription activation by a variety of AraC/XylS family activators does not depend on the class II-specific activation determinant in the N-terminal domain of the RNA polymerase alpha subunit 10.1128/JB.182.24.7075-7077.2000
Optimization of the Palindromic Order of the TtgR Operator Enhances Binding Cooperativity 10.1016/j.jmb.2007.04.025
In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase 10.1111/j.1758-2229.2009.00032.x
Regulation of nitrogenase levels in Anabaena sp. ATCC 33047 and other filamentous cyanobacteria 10.1007/BF00423268
Genetic engineering of a highly solvent-tolerant Pseudomonas putida strain for biotransformation of toluene to p-hydroxybenzoate 10.1128/AEM.69.9.5120-5127.2003
Purification and characterization of glutamine synthetase from the unicellular cynabacterium Anacystis nidulans 10.1016/0304-4165(85)90247-8
Designing bacteria for the degradation of nitro- and chloroaromatic pollutants 10.1007/s001140050273
Responses of Pseudomonas putida to toxic aromatic carbon sources 10.1016/j.jbiotec.2012.01.026
A general profile for the MerR family of transcriptional regulators constructed using the semi-automated Provalidator tool 10.1111/j.1758-2229.2009.00067.x
Comparative genomic analysis of solvent extrusion pumps in Pseudomonas strains exhibiting different degrees of solvent tolerance 10.1007/s00792-003-0331-x
Intramolecular signal transmission in a tetrameric repressor of the IclR family 10.1073/pnas.1018894108
New molecular techniques for pathogen analysis, in silico determination of RND efflux pump substrate specificity, shotgun proteomic monitoring of bioremediation and yeast bio-applications 10.1111/j.1751-7915.2010.00225.x
In vivo gene expression of Pseudomonas putidaKT2440 in the rhizosphere of different plants 10.1111/1751-7915.12037
A double mutant of Pseudomonas putida JLR11 deficient in the synthesis of the nitroreductase PnrA and assimilatory nitrite reductase NasB is impaired for growth on 2,4,6-trinitrotoluene (TNT) 10.1111/j.1462-2920.2006.01012.x
The sensor kinase TodS operates by a multiple step phosphorelay mechanism involving two autokinase domains 10.1074/jbc.M900521200
Microbial goods from single cells and metagenomes 10.1016/j.mib.2008.05.003
The methionine biosynthetic pathway from homoserine in Pseudomonas putida involves the metW, metX, metZ, metH and metE gene products 10.1007/s002030100293
Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying 10.1128/AEM.72.1.472-477.2006
Engineering Biological Approaches for Detection of Toxic Compounds: A New Microbial Biosensor Based on the Pseudomonas putida TtgR Repressor 10.1007/s12033-015-9849-2
Members of the IclR family of bacterial transcriptional regulators function as activatorsand/or repressors 10.1111/j.1574-6976.2005.00008.x
Environmental biotechnology 10.1016/j.copbio.2013.04.002
Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: In vitro expression technology capture and identification of root-activated promoters 10.1128/JB.187.12.4033-4041.2005
Biotransformation in double-phase systems: Physiological responses of Pseudomonas putida DOT-T1E to a double phase made of aliphatic alcohols and biosynthesis of substituted catechols 10.1128/AEM.70.6.3637-3643.2004
Leucines 193 and 194 at the N-terminal domain of the XylS protein, the positive transcriptional regulator of the TOL meta-cleavage pathway, are involved in dimerization 10.1128/JB.185.10.3036-3041.2003
Environmental Microbiology meets Microbial Biotechnology 10.1111/j.1751-7915.2008.00068.x
Temperature and pyoverdine-mediated iron acquisition control surface motility of Pseudomonas putida 10.1111/j.1462-2920.2007.01286.x
Ventilation and heart rate monitoring in drivers using a contactless electrical bioimpedance system 10.1088/1742-6596/434/1/012047
Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals 10.1073/pnas.0701547104
Rhizoremediation of lindane by root-colonizing Sphingomonas 10.1111/j.1751-7915.2007.00004.x
XylS-Pm Promoter Interactions through Two Helix-Turn-Helix Motifs: Identifying XylS Residues Important for DNA Binding and Activation 10.1016/j.jmb.2007.10.047
The nifH, nifM and nifN genes of Azotobacter vinelandii: Characterisation by Tn 5 mutagenesis and isolation from pLAFR1 gene banks 10.1007/BF00430445
Evidence for chemoreceptors with bimodular ligand-binding regions harboring two signal-binding sites 10.1073/pnas.1201400109
Residues 137 and 153 of XylS influence contacts with the C-terminal domain of the RNA polymerase α subunit 10.1006/bbrc.2001.5615
Exploring the rhizospheric and endophytic bacterial communities of Acer pseudoplatanus growing on a TNT-contaminated soil: towards the development of a rhizocompetent TNT-detoxifying plant growth promoting consortium 10.1007/s11104-014-2260-0
A two-partner secretion system is involved in seed and root colonization and iron uptake by Pseudomonas putida KT2440 10.1111/j.1462-2920.2005.00940.x
Multiple signals modulate the activity of the complex sensor kinase TodS 10.1111/1751-7915.12142
Microbial biotechnology: Biofuels, genotoxicity reporters and robust agro-ecosystems 10.1111/j.1751-7915.2010.00177.x
Transcriptional control by two interacting regulatory proteins: Identification of the PtxS binding site at PtxR 10.1093/nar/gkt773
Specific gene loci of clinical Pseudomonas putida isolates 10.1371/journal.pone.0147478
The TetR family of transcriptional repressors 10.1128/MMBR.69.2.326-356.2005
Novel BRAFI599Insmutation identified in a follicular variant of a papillary thyroid carcinoma: A molecular modeling approach 10.4158/EP13465.CR
OYE flavoprotein reductases initiate the condensation of TNT-derived intermediates to secondary diarylamines and nitrite 10.1021/es071449w
Lessons from the genome of a lithoautotroph: Making biomass from almost nothing 10.1128/JB.185.9.2690-2691.2003
Gene expression in Pseudomonas 10.1007/BF00328031
XylS activator and RNA polymerase binding sites at the Pm promoter overlap 10.1016/S0014-5793(02)02730-8
The XyIS-dependent Pm promoter is transcribed in vivo by RNA polymerase with σ32 or σ38 depending on the growth phase 10.1046/j.1365-2958.1999.01249.x
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates: Differential chemotactic response towards receptor ligands 10.1074/jbc.M110.110403
Single amino acids changes in the signal receptor domain of XylR resulted in mutants that stimulate transcription in the absence of effectors 10.1074/jbc.270.10.5144
Changes in myocardial electrical impedance in human heart graft rejection 10.1016/j.ejheart.2008.04.013
Physiological responses of Pseudomonas putida to formaldehyde during detoxification 10.1111/j.1751-7915.2007.00014.x
Pipelines for New Chemicals: A strategy to create new value chains and stimulate innovation-based economic revival in Southern European countries 10.1111/1462-2920.12337
The ttgGHI solvent efflux pump operon of Pseudomonas putida DOT-T1E is located on a large self-transmissible plasmid 10.1111/j.1462-2920.2007.01276.x
XylS domain interactions can be deduced from intraallelic dominance in double mutants of Pseudomonas putida 10.1007/BF00279387
Restoration of a Mediterranean forest after a fire: Bioremediation and rhizoremediation field-scale trial 10.1111/1751-7915.12138
A WbpL mutant of Pseudomonas putida DOT-T1E strain, which lacks the 0-antigenic side chain of lipopolysaccharides, is tolerant to organic solvent shocks 10.1007/s007920100176
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators 10.1146/annurev.micro.51.1.341
Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization 10.1016/S0378-1119(99)00113-4
Pseudomonas aeruginosa strain RW41 mineralizes 4-chlorobenzenesulfonate, the major polar by-product from DDT manufacturing 10.1111/j.1462-2920.2008.01575.x
Exploiting environmental niches and the potential of environmental microbes 10.1111/j.1758-2229.2009.00072.x
Mutations in each of the tol genes of Pseudomonas putida reveal that they are critical for maintenance of outer membrane stability 10.1128/JB.182.17.4764-4772.2000
A bioluminescent derivative of Pseudomonas putida KT2440 for deliberate release into the environment 10.1016/S0168-6496(00)00089-1
Respiration of 2,4,6-trinitrotoluene by Pseudomonas sp. strain JLR11 10.1128/JB.182.5.1352-1355.2000
Responses of Pseudomonas to small toxic molecules by a mosaic of domains 10.1016/j.mib.2009.02.001
The IclR family of transcriptional activators and repressors can be defined by a single profile 10.1110/ps.051857206
Bactericidal and bacteriostatic antibiotics and the Fenton reaction 10.1111/1751-7915.12120
Characterization of the Pseudomonas putida mobile genetic element ISPpu10: An occupant of repetitive extragenic palindromic sequences 10.1128/JB.188.1.37-44.2006
Type II hydride transferases from different microorganisms yield nitrite and diarylamines from polynitroaromatic compounds 10.1128/AEM.00388-08
Microbial Biotechnology: Evolution of your premier journal 10.1111/1751-7915.12009
Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression 10.1074/jbc.M511095200
Cell density-dependent gene contributes to efficient seed colonization by Pseudomonas putida KT2440 10.1128/AEM.70.9.5190-5198.2004
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440 10.1111/j.1758-2229.2009.00084.x
Using Genomics to Unveil Bacterial Determinants of Rhizosphere Life Style 10.1002/9781118297674.ch2
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1 10.1111/1462-2920.12037
Involvement of the TonB system in tolerance to solvents and drugs in Pseudomonas putida DOT-T1E 10.1128/JB.183.18.5285-5292.2001
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteins 10.1073/pnas.0602902103
Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: Genomic and flux analysis 10.1128/JB.00203-07
Evidence for in situ crude oil biodegradation after the Prestige oil spill 10.1111/j.1462-2920.2005.00742.x
Simultaneous catabolite repression between glucose and toluene metabolism in Pseudomonas putida is channeled through different signaling pathways 10.1128/JB.00679-07
Fatty acid biosynthesis is involved in solvent tolerance in Pseudomonas putida DOT-T1E 10.1111/j.1462-2920.2004.00578.x
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials 10.1016/j.jmb.2007.03.062
Cross-regulation between a novel two-component signal transduction system for catabolism of toluene in pseudomonas mendocina and the TodST system from pseudomonas putida 10.1128/JB.184.24.7062-7067.2002
Catabolism of Phenylalanine by Pseudomonas putida: The NtrC-family PhhR Regulator Binds to Two Sites Upstream from the phhA Gene and Stimulates Transcription with σ70 10.1016/j.jmb.2006.12.008
A two-component regulatory system integrates redox state and population density sensing in Pseudomonas putida 10.1128/JB.00868-08
Tolerance to sudden organic solvent shocks by soil bacteria and characterization of Pseudomonas putida strains isolated from toluene polluted sites 10.1021/es991171a
The davDT operon of Pseudomonas putida, involved in lysine catabolism, is induced in response to the pathway intermediate δ-aminovaleric acid 10.1128/JB.186.11.3439-3446.2004
Broad-host range expression vectors containing manipulated meta-cleavage pathway regulatory elements of the TOL plasmid 10.1016/0014-5793(88)81431-5
Removal of organic toxic chemicals in the rhizosphere and phyllosphere of plants 10.1111/j.1751-7915.2009.00090_13.x
Functional analysis of aromatic biosynthetic pathways in Pseudomonas putida KT2440 10.1111/j.1751-7915.2008.00062.x
Interactions of the XylS regulators with the C-terminal domain of the RNA polymerase α subunit influence the expression level from the cognate Pm promoter 10.1016/S0014-5793(01)02192-5
Taxonomic and Functional Metagenomic Profiling of the Microbial Community in the Anoxic Sediment of a Sub-saline Shallow Lake (Laguna de Carrizo, Central Spain) 10.1007/s00248-011-9903-y
Multiple and interconnected pathways for l-lysine catabolism in Pseudomonas putida KT2440 10.1128/JB.187.21.7500-7510.2005
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440 10.1128/AAC.05398-11
Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library 10.1111/j.1462-2920.2010.02166.x
Subfunctionality of hydride transferases of the old yellow enzyme family of flavoproteins of Pseudomonas putida 10.1128/AEM.00386-08
TtgV Bound to a Complex Operator Site Represses Transcription of the Promoter for the Multidrug and Solvent Extrusion TtgGHI Pump 10.1128/JB.186.10.2921-2927.2004
Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida 10.1111/j.1574-6976.2010.00249.x
Sensing of environmental signals: Classification of chemoreceptors according to the size of their ligand binding regions 10.1111/j.1462-2920.2010.02325.x
The Prc and RseP proteases control bacterial cell-surface signalling activity 10.1111/1462-2920.12371
Removal of nitrate from industrial wastewaters in a pilot plant by nitrate-tolerant Klebsiella oxytoca CECT 4460 and Arthrobacter globiformis CECT 4500 10.1002/(SICI)1097-0290(19980605)58:5<510::AID-BIT7>3.0.CO;2-G
Corrigendum: In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase 10.1111/j.1758-2229.2009.00062.x
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital 10.1371/journal.pone.0081604
Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere 10.1186/gb-2007-8-9-r179
Adaptive drug resistance mediated by root-nodulation-cell division efflux pumps 10.1111/j.1469-0691.2008.02693.x
First- and second-generation biochemicals from sugars: Biosynthesis of itaconic acid 10.1111/1751-7915.12333
Photosynthetic production of ammonia 10.1007/BF01944528
Bioremediation of 2,4,6-trinitrotoluene under field conditions 10.1021/es062165z
Cloning, structure and expression of a pea cDNA clone coding for a photosynthetic fructose-1,6-bisphosphatase with some features different from those of the leaf chloroplast enzyme 10.1007/BF02411553
Plant-bacteria interactions in the removal of pollutants 10.1016/j.copbio.2012.09.011
Identification of reciprocal adhesion genes in pathogenic and non-pathogenic Pseudomonas 10.1111/j.1462-2920.2012.02732.x
Mechanisms of solvent resistance mediated by interplay of cellular factors in Pseudomonas putida 10.1093/femsre/fuv006
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants 10.1016/j.febslet.2012.07.031
Fate of Pseudomonas putida after release into lake water mesocosms: Different survival mechanisms in response to environmental conditions 10.1007/BF00165812
Field trial on removal of petroleum-hydrocarbon pollutants using a microbial consortium for bioremediation and rhizoremediation 10.1111/1758-2229.12174
Dual System to Reinforce Biological Containment of Recombinant Bacteria Designed for Rhizoremediation 10.1128/AEM.67.6.2649-2656.2001
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance 10.1111/1462-2920.12368
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray 10.1111/j.1462-2920.2005.00890.x
Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid 10.1128/AEM.00619-12
Bacterial responses and interactions with plants during rhizoremediation 10.1111/j.1751-7915.2009.00113.x
In situ X-ray data collection from highly sensitive crystals of Pseudomonas putida PtxS in complex with DNA 10.1107/S1744309112028540
Critical nucleotides in the upstream region of the XylS-dependent TOL meta-cleavage pathway operon promoter as deduced from analysis of mutants 10.1074/jbc.274.4.2286
Transcriptional organization of the Pseudomonas putida tol-oprL genes 10.1128/JB.185.1.184-195.2003
Study of the TmoS/TmoT two-component system: Towards the functional characterization of the family of TodS/TodT like systems 10.1111/j.1751-7915.2011.00322.x
Biomonitoring of urinary metals in a population living in the vicinity of industrial sources: A comparison with the general population of Andalusia, Spain 10.1016/j.scitotenv.2008.08.041
Understanding butanol tolerance and assimilation in Pseudomonas putidaBIRD-1: An integrated omics approach 10.1111/1751-7915.12328
Solvent tolerance in Gram-negative bacteria 10.1016/j.copbio.2011.11.015
Mutational analysis of the highly conserved C-terminal residues of the XylS protein, a member of the AraC family of transcriptional regulators 10.1016/S0014-5793(00)01749-X
Redundancy of enzymes for formaldehyde detoxification in Pseudomonas putida 10.1128/JB.00076-09
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas 10.1111/j.1758-2229.2011.00255.x
RNA polymerase holoenzymes can share a single transcription start site for the Pm promoter: Critical nucleotides in the -7 to -18 region are needed to select between RNA polymerase with σ38 or σ32 10.1074/jbc.M505415200
Detection of multiple extracytoplasmic function (ECF) sigma factors in the genome of Pseudomonas putida KT2440 and their counterparts in Pseudomonas aeruginosa PA01 10.1046/j.1462-2920.2002.00371.x
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440 10.1111/1758-2229.12167
Inhibition of growth and induction of apoptosis in human breast cancer by transfection of gef gene 10.1038/sj.bjc.6601064
Pseudomonas putida mutants in the exbBexbDtonB gene cluster are hypersensitive to environmental and chemical stressors 10.1111/j.1462-2920.2004.00595.x
Cyclic diguanylate turnover mediated by the sole GGDEF/EAL response regulator in Pseudomonas putida: Its role in the rhizosphere and an analysis of its target processes 10.1111/j.1462-2920.2011.02499.x
16S rDNA phylogeny and distribution of lin genes in novel hexachlorocyclohexane-degrading Sphingomonas strains 10.1111/j.1462-5822.2005.00820.x
Characterization of molecular interactions using isothermal titration calorimetry 10.1007/978-1-4939-0473-0_16
Towards a genome-wide mutant library of pseudomonas putida strain KT2440 10.1007/978-1-4020-6097-7_8
Control of expression of divergent pseudomonas putida put promoters for proline catabolism 10.1128/AEM.66.12.5221-5225.2000
Mechanisms of solvent tolerance in gram-negative bacteria 10.1146/annurev.micro.56.012302.161038
Limits in energy generation and biotechnology of primary and secondary products 10.1111/j.1751-7915.2008.00052.x
Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators 10.1101/gad.603510
Survival of Pseudomonas putida KT2440 in soil and in the rhizosphere of plants under greenhouse and environmental conditions 10.1016/S0038-0717(99)00156-X
Short and direct science: Environmental Microbiology Reports 10.1111/j.1758-2229.2009.00048.x
Biological degradation of 2,4,6-trinitrotoluene 10.1128/MMBR.65.3.335-352.2001
Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds 10.1128/JB.182.9.2363-2369.2000
Assessing bacterial diversity in the rhizosphere of Thymus zygis growing in the Sierra Nevada National Park (Spain) through culture-dependent and independent approaches 10.1371/journal.pone.0146558
Diversity at its best: Bacterial taxis 10.1111/j.1462-2920.2010.02383.x
Microbial responses to xenobiotic compounds. Identification of genes that allow Pseudomonas putida KT2440 to cope with 2,4,6-trinitrotoluene 10.1111/j.1751-7915.2009.00085.x
TtgV represses two different promoters by recognizing different sequences 10.1128/JB.01504-08
Complexity in efflux pump control: Cross-regulation by the paralogues TtgV and TtgT 10.1111/j.1365-2958.2007.06004.x
Integration of signals through Crc and PtsN in catabolite repression of Pseudomonas putida TOL plasmid pWW0 10.1128/AEM.71.8.4191-4198.2005
Global regulation of food supply by Pseudomonas putida DOT-T1E 10.1128/JB.01129-09
Urinary levels of arsenic and heavy metals in children and adolescents living in the industrialised area of Ria of Huelva (SW Spain) 10.1016/j.envint.2010.04.012
Plasmolysis induced by toluene in a cyoB mutant of Pseudomonas putida 10.1111/j.1462-2920.2004.00621.x
Levels and chemical composition of PM in a city near a large Cu-smelter in Spain 10.1039/c0em00708k
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains 10.3389/fmicb.2015.00871
Identification of the initial steps in D-lysine catabolism in Pseudomonas putida 10.1128/JB.01538-06
Different modes of binding of mono- and biaromatic effectors to the transcriptional regulator TTGV: Role in differential derepression from its cognate operator 10.1074/jbc.M610032200
Catabolite repression of the TodS/TodT two-component system and effector-dependent transphosphorylation of TodT as the basis for toluene dioxygenase catabolic pathway control 10.1128/JB.00379-10
Involvement of the global crp regulator in cyclic amp-dependent utilization of aromatic amino acids by pseudomonas putida 10.1128/JB.06353-11
Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor 10.1128/JB.00520-10
Comparison of omega wave system and polar S810i to detect R-R intervals at rest 10.1055/s-0030-1248319
Microbial Biotechnology from medicine to bacterial population dynamics 10.1111/j.1751-7915.2009.00110.x
PnrA, a new nitroreductase-family enzyme in the TNT-degrading strain Pseudomonas putida JLR11 10.1111/j.1462-2920.2005.00801.x
Residues 137 and 153 at the N terminus of the XylS protein influence the effector profile of this transcriptional regulator and the σ factor used by RNA polymerase to stimulate transcription from its cognate promoter 10.1074/jbc.M110226200
Degradation of o-methoxybenzoate by a two-member consortium made up of a gram-positive Arthrobacter strain and a gram-negative Pantotea strain 10.1023/A:1026541518663
BacTregulators: A database of transcriptional regulators in bacteria and archaea 10.1093/bioinformatics/bth330
Transoesophageal electronic bioimpedance device for the study of post-transplant heart rejection 10.1007/978-3-540-89208-3_281
The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment 10.1111/j.1462-2920.2011.02492.x
Molecular binding mechanism of TtgR repressor to antibiotics and antimicrobials 10.1371/journal.pone.0138469
A broad range of themes in Microbial Biotechnology 10.1111/j.1751-7915.2008.00076.x
Escherichia coli has multiple enzymes that attack TNT and release nitrogen for growth 10.1111/j.1462-2920.2007.01272.x
Signal-regulator interactions, genetic analysis of the effector binding site of xyls, the benzoate-activated positive regulator of Pseudomonas TOL plasmid meta-cleavage pathway operon 10.1016/0022-2836(90)90358-S
Mutations in genes involved in the flagellar export apparatus of the solvent-tolerant Pseudomonas putida DOT-T1E strain impair motility and lead to hypersensitivity to toluene shocks 10.1128/JB.183.14.4127-4133.2001
The cytotoxic activity of the phage E protein suppress the growth of murine B16 melanomas in vitro and in vivo 10.1007/s00109-009-0493-9
Transition from reversible to irreversible attachment during biofilm formation by Pseudomonas fluorescens WCS365 requires an ABC transporter and a large secreted protein 10.1046/j.1365-2958.2003.03615.x
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate 10.1107/S1744309112004940
Antibiotic-dependent induction of Pseudomonas putida DOT-T1E TtgABC efflux pump is mediated by the drug binding repressor TtgR 10.1128/AAC.47.10.3067-3072.2003
Mechanisms for solvent tolerance in bacteria 10.1074/jbc.272.7.3887
Physical organization of the upper pathway operon promoter of the Pseudomonas TOL plasmid. Sequence and positional requirements for XylR-dependent activation of transcription 10.1007/BF00281629
Toluene tolerance systems in pseudomonas 10.1007/978-4-431-54520-0_11
Analysis of the core genome and pangenome of Pseudomonas putida 10.1111/1462-2920.13015
Pseudomonas putida KT2440 causes induced systemic resistance and changes in Arabidopsis root exudation 10.1111/j.1758-2229.2009.00091.x
Metabolic engineering, new antibiotics and biofilm viscoelasticity 10.1111/j.1751-7915.2009.00157.x
New molecular tools for enhancing methane production, explaining thermodynamically limited lifestyles and other important biotechnological issues 10.1111/j.1751-7915.2009.00134.x
Regulation of glucose metabolism in Pseudomonas. The phosphorylative branch and Entner-Doudoroff enzymes are regulated by a repressor containing a sugar isomerase domain 10.1074/jbc.M109.014555
Cold is cool, the human microbiota and taking multiple SIPs 10.1111/j.1751-7915.2011.00287.x
Analysis of the mRNA structure of the Pseudomonas putida TOL meta fission pathway operon around the transcription initiation point, the xylTE and the xylFJ regions 10.1016/0167-4781(93)90149-8
Compensatory role of the cis-trans-isomerase and cardiolipin synthase in the membrane fluidity of Pseudomonas putida DOT-T1E 10.1111/j.1462-2920.2007.01283.x
A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality 10.1111/j.1462-2920.2006.01236.x
Bacterial sensor kinases: Diversity in the recognition of environmental signals 10.1146/annurev.micro.112408.134054
Transcriptional Phase Variation at the flhB Gene of Pseudomonas putida DOT-T1E Is Involved in Response to Environmental Changes and Suggests the Participation of the Flagellar Export System in Solvent Tolerance 10.1128/JB.186.6.1905-1909.2004
Struggling to get a universal meningococcal vaccine and novel uses for bacterial toxins in cancer treatment 10.1111/j.1751-7915.2010.00195.x
Regulation of the cyclopropane synthase cfaB gene in Pseudomonas putida KT2440 10.1111/j.1574-6968.2011.02317.x
The Pseudomonas aeruginosa quinolone quorum sensing signal alters the multicellular behaviour of Pseudomonas putida KT2440 10.1016/j.resmic.2011.06.013
Chemical and microbiological characterization of atmospheric particulate matter during an intense african dust event in Southern Spain 10.1021/es3051235
Laboratory research aimed at closing the gaps in microbial bioremediation 10.1016/j.tibtech.2011.06.007
PhhR Binds to Target Sequences at Different Distances with Respect to RNA Polymerase in Order to Activate Transcription 10.1016/j.jmb.2009.09.045
Physiologically relevant divalent cations modulate citrate recognition by the McpS chemoreceptor 10.1002/jmr.1101
Bioremediation of polynitrated aromatic compounds: Plants and microbes put up a fight 10.1016/j.copbio.2005.03.010
Events in root colonization by pseudomonas putida 10.1007/978-94-017-9555-5_10
Summary of the Sussex-Huawei locomotion-transportation recognition challenge
Observation of a manifold in the chaotic phase space of an asymmetric optical microcavity
Localized temporal variation of Earth's inner-core boundary from high-quality waveform doublets
Off-axis multi-wavelength dispersion controlling metalens for multi-color imaging
Impact of United States political sanctions on international collaborations and research in Iran