Protocol for Community‐created Public MS/MS Reference Spectra Within the Global Natural Products Social Molecular Networking Infrastructure
Fernando Vargas
Kelly C. Weldon
Nicole Sikora
Mingxun Wang
Zheng Zhang
Emily C. Gentry
Morgan W. Panitchpakdi
Andrés Mauricio Caraballo‐Rodríguez
Pieter C. Dorrestein
Alan K. Jarmusch
Rapid Communications in Mass Spectrometry, 2020-1-13
Mingxun Wang
Wang Mingxun
/ Ming
ORCID: 0000-0001-7647-6097
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
10.1038/nbt.3597
Detection of Ovarian Cancer Using Samples Sourced from the Vaginal Microenvironment
10.1101/597740
MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools
10.1101/654459
Repository-scale Co- and Re-analysis of Tandem Mass Spectrometry Data
10.1101/750471
Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure
10.1101/804401
Protocol for community‐created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure
10.1002/rcm.8725
Universal MS/MS Visualization and Retrieval with the Metabolomics Spectrum Resolver Web Service
10.1101/2020.05.09.086066
Ion Identity Molecular Networking in the GNPS Environment
10.1101/2020.05.11.088948
ReDU: a framework to find and reanalyze public mass spectrometry data
10.1038/s41592-020-0916-7
The ant fungus garden acts as an external digestive system
10.1101/2020.11.18.389361
A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria
10.3390/md19010020
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment
10.1038/s41467-021-23953-9
Quick-start infrastructure for untargeted metabolomics analysis in GNPS
10.1038/s42255-021-00429-0
Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden
10.1128/mSystems.00601-21
A Synthesis-Based Reverse Metabolomics Approach for the Discovery of Chemical Structures from Humans and Animals.
10.21203/rs.3.rs-820302/v1
Native Metabolomics Identifies the Rivulariapeptolide Family of Protease Inhibitors
10.1101/2021.09.03.458897
Emily Gentry
Gentry Emily
ORCID: 0000-0002-0016-8132
Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure
10.1101/804401
Protocol for community‐created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure
10.1002/rcm.8725
Kelly Weldon
Weldon Kelly
ORCID: 0000-0003-1064-8153
Metabolome-informed microbiome analysis refines metadata classifications and reveals unexpected medication transfer in captive cheetahs
10.1101/790063
Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure
10.1101/804401
Mass spectrometry searches using MASST
10.1038/s41587-019-0375-9
Protocol for community‐created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure
10.1002/rcm.8725
Reference data based insights expand understanding of human metabolomes
10.1101/2020.07.08.194159
Targeted Neuronal Activation of the Gastrointestinal Tract Shapes the Environment of the Gut in Mice
10.1101/2021.04.12.439539
Reference data-set driven metabolomics
10.21203/rs.3.rs-654519/v1
Fernando Vargas
Vargas Fernando
ORCID: 0000-0001-5847-2439
Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure
10.1101/804401
ZODIAC: database-independent molecular formula annotation using Gibbs sampling reveals unknown small molecules
10.1101/842740
Mass spectrometry searches using MASST
10.1038/s41587-019-0375-9
Protocol for community‐created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure
10.1002/rcm.8725
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
10.1038/s41596-020-0317-5
Mauricio Caraballo
Caraballo Mauricio
/ Mauricio Caraballo
/ Andres M Caraballo-Rodriguez
ORCID: 0000-0001-5499-2728
Amphotericin B as an inducer of griseofulvin-containing guttate in the endophytic fungus Xylaria cubensis FLe9
10.1007/s00049-017-0243-3
Molecular inter-kingdom interactions of endophytes isolated from Lychnophora ericoides
10.1038/s41598-017-05532-5
Expanding the Chemical Repertoire of the Endophyte Streptomyces albospinus RLe7 Reveals Amphotericin B as an Inducer of a Fungal Phenotype
10.1021/acs.jnatprod.6b00870
Endophytic Actinobacteria from the Brazilian Medicinal PlantLychnophora ericoidesMart. and the Biological Potential of Their Secondary Metabolites
10.1002/cbdv.201500225
Protocol for Community‐created Public MS/MS Reference Spectra Within the Global Natural Products Social Molecular Networking Infrastructure
10.1002/rcm.8725
Mass spectrometry searches using MASST
10.1038/s41587-019-0375-9
Cryptic Species Account for the Seemingly Idiosyncratic Secondary Metabolism of Sarcophyton glaucum Specimens Collected in Palau
10.1021/acs.jnatprod.9b01128
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages
10.1016/j.foodchem.2019.125290
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
10.1038/s41587-019-0209-9
MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools
10.3390/metabo9070144
The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization
10.1038/s41467-019-09944-x
Propagating annotations of molecular networks using in silico fragmentation
10.1371/journal.pcbi.1006089
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
10.1038/nbt.3597
Wildlife-microbiome interactions and disease: exploring opportunities for disease mitigation across ecological scales
10.1016/j.ddmod.2019.08.012
Chemical signaling involved in plant–microbe interactions
10.1039/c7cs00343a
A Convolutional Neural Network-Based Approach for the Rapid Characterization of Molecularly Diverse Natural Products
10.1021/jacs.9b13786
